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By members and collaborators of the Functional Imaging Laboratory


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Publications of year 2005

Articles in journal, book chapters

  1. J. Ashburner and K.J. Friston. Unified segmentation. NeuroImage, 26:839-851, 2005. [doi:doi:10.1016/j.neuroimage.2005.02.018] Keyword(s): spatial, VBM, Bayesian, registration, normalisation, MRI, segment.
    @Article{ ashburner05,
    author = {J. Ashburner and K.J. Friston},
    title = {Unified segmentation},
    journal = {{N}euro{I}mage},
    volume = {26},
    pages = {839--851},
    year = {2005},
    keyword = {spatial,VBM,Bayesian,registration,normalisation,MRI,segment},
    doi = {doi:10.1016/j.neuroimage.2005.02.018} 
    }
    


  2. K.J. Friston, R.N.A. Henson, C. Phillips, and J. Mattout. Bayesian estimation of evoked and induced responses. Human Brain Mapping, 27:722-735, 2005. [doi:10.1002/hbm.20214] Keyword(s): EEG, MEG.
    @Article{ karl_induced,
    author = {K.J. Friston and R.N.A. Henson and C. Phillips and J. Mattout},
    title = {Bayesian estimation of evoked and induced responses},
    journal = {{H}uman {B}rain {M}apping},
    year = {2005},
    volume = {27},
    pages = {722--735},
    keywords = {EEG,MEG},
    doi = {10.1002/hbm.20214} 
    }
    


  3. K.J. Friston, W.D. Penny, and D.E. Glaser. Conjunction revisited. NeuroImage, 25(3):661-667, 2005. [PDF] [doi:10.1016/j.neuroimage.2005.01.013] Keyword(s): conjunction.
    @Article{ karl_conj_revisit,
    author = {K.J. Friston and W.D. Penny and D.E. Glaser},
    title = {Conjunction revisited},
    journal = {{N}euro{I}mage},
    year = {2005},
    volume = {25},
    number = {3},
    pages = {661--667},
    doi = {10.1016/j.neuroimage.2005.01.013},
    keyword = {conjunction},
    pdf = { /spm/doc/papers/karl_conj_revisit.pdf } 
    }
    


  4. K.J. Friston, K.E. Stephan, T.E. Lund, A. Morcom, and S.J. Kiebel. Mixed-effects and fMRI studies. NeuroImage, 24:244-252, 2005. [PDF] Keyword(s): fMRI, GLM.
    @Article{ karl_mixed,
    author = {K.J. Friston and K.E. Stephan and T.E. Lund and A. Morcom and S.J. Kiebel},
    title = {Mixed-effects and f{MRI} studies},
    journal = {{N}euro{I}mage},
    year = {2005},
    volume = {24},
    pages = {244--252},
    keyword = {fMRI,GLM},
    pdf = { /spm/doc/papers/karl_mixed.pdf } 
    }
    


  5. L. Harrison, O. David, and K.J. Friston. Stochastic models of neuronal dynamics. NeuroImage, 360:1075-1091, 2005. [doi:10.1098/rstb.2005.1648] Keyword(s): fMRI, GLM, spatial.
    @Article{ lee_stochastic,
    author = {L. Harrison and O. David and K.J. Friston},
    title = {Stochastic models of neuronal dynamics},
    journal = {{N}euro{I}mage},
    year = {2005},
    volume = {360},
    pages = {1075--1091},
    doi = {10.1098/rstb.2005.1648},
    keyword = {fMRI,GLM,spatial} 
    }
    


  6. S.J. Kiebel, C. Tallon-Baudry, and K.J. Friston. Parametric analysis of oscillatory activity as measured with EEG/MEG. Human Brain Mapping, 26(3):170-177, 2005. [PDF] Keyword(s): EEG, GLM, ERP, MEG.
    @Article{ kiebel_eeg3,
    author = {S.J. Kiebel and C. Tallon-Baudry and K.J. Friston},
    title = {Parametric analysis of oscillatory activity as measured with {EEG/MEG}},
    journal = {{H}uman {B}rain {M}apping},
    year = {2005},
    volume = {26},
    number = {3},
    pages = {170--177},
    keyword = {EEG,GLM,ERP,MEG},
    pdf = {/spm/doc/papers/sjk_eeg3.pdf} 
    }
    


  7. J. Kilner, S.J. Kiebel, and K.J. Friston. Applications of random field theory to electrophysiology. Neuroscience Letters, 374:174-178, 2005.
    @Article{ james_rft,
    author = {J. Kilner and S.J. Kiebel and K.J. Friston},
    title = {Applications of random field theory to electrophysiology},
    journal = {Neuroscience Letters},
    year = {2005},
    volume = {374},
    pages = {174--178} 
    }
    


  8. A. Mechelli, C.J. Price, K.J. Friston, and J. Ashburner. Voxel-Based Morphometry of the Human Brain: Methods and Applications. Current Medical Imaging Reviews, pp 105-113, 2005. [PDF] Keyword(s): VBM.
    @Article{ am_vbmreview,
    author = {A. Mechelli and C.J. Price and K.J. Friston and J. Ashburner},
    title = {Voxel-Based Morphometry of the Human Brain: Methods and Applications},
    journal = {{C}urrent {M}edical {I}maging {R}eviews},
    year = {2005},
    optvolume = {1},
    number = {},
    pages = {105-113},
    keyword = {VBM},
    pdf = {/spm/doc/papers/am_vbmreview.pdf} 
    }
    


  9. T.E. Nichols, M. Brett, J. Andersson, T. Wager, and J.B. Poline. Valid conjunction inference with the minimum statistic. NeuroImage, 25:653-660, 2005. [PDF] Keyword(s): conjunction.
    @Article{ tom_valid,
    author = {T.E. Nichols and M. Brett and J. Andersson and T. Wager and J.B. Poline},
    title = {Valid conjunction inference with the minimum statistic},
    journal = {{N}euro{I}mage},
    year = {2005},
    volume = {25},
    pages = {653-660},
    keyword = {conjunction},
    pdf = { /spm/doc/papers/NicholsBrett.pdf } 
    }
    


  10. D. Pantazis, T.E. Nichols, S. Baillet, and R.M. Leahy. A comparison of random field theory and permutation methods for the statistical analysis of MEG data.. NeuroImage, 25:383-394, 2005. [PDF] Keyword(s): RFT, MEG, nonparametric.
    @Article{ tom_rft_meg,
    author = {D. Pantazis and T.E. Nichols and S. Baillet and R.M. Leahy},
    title = {A comparison of random field theory and permutation methods for the statistical analysis of MEG data. },
    journal = {{N}euro{I}mage},
    year = {2005},
    volume = {25},
    pages = {383-394},
    keyword = {RFT,MEG,nonparametric},
    pdf = { /spm/doc/papers/PantazisNI.pdf } 
    }
    


  11. W.D. Penny, G. Flandin, and N. Trujillo-Bareto. Bayesian Comparison of Spatially Regularised General Linear Models. Human Brain Mapping, 28:275-293, 2005. [PDF] [doi:doi:10.1002/hbm.20327] Keyword(s): Bayesian, fMRI, PPM, GLM.
    @Article{ will_bayes_srglm,
    author = {W.D. Penny and G. Flandin and N. Trujillo-Bareto},
    title = {Bayesian {C}omparison of {S}patially {R}egularised {G}eneral {L}inear {M}odels},
    journal = {{H}uman {B}rain {M}apping},
    year = {2005},
    volume = {28},
    pages = {275--293},
    keyword = {Bayesian,fMRI,PPM,GLM},
    doi = {doi:10.1002/hbm.20327},
    pdf = { /spm/doc/papers/vb4.pdf } 
    }
    


  12. W.D. Penny, Z. Ghahramani, and K.J. Friston. Bilinear Dynamical Systems. Phil Trans R Soc B, 360(1457):983-993, 2005. [PDF] [doi:10.1098/rstb.2005.1642] Keyword(s): Dynamic, Markov, fMRI.
    @Article{ will_bds,
    author = {W.D. Penny and Z. Ghahramani and K.J. Friston},
    title = {Bilinear {D}ynamical {S}ystems},
    journal = {Phil Trans R Soc B},
    year = {2005},
    volume = {360},
    number = {1457},
    pages = {983--993},
    doi = { 10.1098/rstb.2005.1642},
    pdf = {http://www.fil.ion.ucl.ac.uk/~wpenny/publications/penny_bds.pdf},
    keyword = {Dynamic,Markov,fMRI} 
    }
    


  13. W.D. Penny, N. Trujillo-Bareto, and K.J. Friston. Bayesian fMRI time series analysis with spatial priors. NeuroImage, 24(2):350-362, 2005. [PDF] [doi:10.1016/j.neuroimage.2004.08.034] Keyword(s): Spatial, fMRI.
    @Article{ vb2,
    author = {W.D. Penny and N. Trujillo-Bareto and K.J. Friston},
    title = {Bayesian f{MRI} time series analysis with spatial priors},
    journal = {{N}euro{I}mage},
    year = {2005},
    volume = {24},
    number = {2},
    pages = {350-362},
    doi = {10.1016/j.neuroimage.2004.08.034},
    pdf = {http://www.fil.ion.ucl.ac.uk/~wpenny/publications/vb2_2005.pdf},
    keyword = {Spatial,fMRI} 
    }
    


  14. C. Phillips, J. Mattout, M.D. Rugg, P. Maquet, and K.J. Friston. An empirical Bayesian solution to the source reconstruction problem in EEG. NeuroImage, 24:997-1011, 2005. [doi:10.1016/j.neuroimage.2004.10.030] Keyword(s): EEG, bayesian.
    @Article{ cp_empirical_eeg,
    author = {C. Phillips and J. Mattout and M.D. Rugg and P. Maquet and K.J. Friston},
    title = {An empirical {B}ayesian solution to the source reconstruction problem in {EEG}},
    journal = {{N}euro{I}mage},
    year = {2005},
    volume = {24},
    pages = {997--1011},
    doi = {10.1016/j.neuroimage.2004.10.030},
    keyword = {EEG,bayesian} 
    }
    


  15. K.E. Stephan, W.D. Penny, J.C. Marshall, G.R. Fink, and K.J. Friston. Investigating the functional role of Callosal connections with Dynamic Causal Models. Ann. N.Y. Acad. Sci., 1064:16-36, 2005. [PDF] [doi:10.1196/annals.1340.008] Keyword(s): DCM.
    @Article{ klaas_dcm_callosum,
    author = {K.E. Stephan and W.D. Penny and J.C. Marshall and G.R. Fink and K.J. Friston},
    title = {Investigating the functional role of Callosal connections with Dynamic Causal Models},
    journal = {Ann. N.Y. Acad. Sci.},
    year = {2005},
    volume = {1064},
    pages = {16--36},
    doi = {10.1196/annals.1340.008},
    keyword = {DCM},
    pdf = {/spm/doc/papers/Stephan_AnnNYAcadSci_1064_16_2005.pdf} 
    }
    


  16. K.J. Friston, W.D. Penny, and O. David. Modelling brain responses. In M.F. Glabus, editor, International Review of Neurobiology, Neuroimaging, Part A. Elsevier, 2005. Keyword(s): Introduction.
    @InCollection{ karl_responses,
    author = {K.J. Friston and W.D. Penny and O. David},
    title = {Modelling brain responses},
    editor = {M.F. Glabus},
    year = {2005},
    booktitle = {International {R}eview of {N}eurobiology, Neuroimaging, {P}art {A}},
    publisher = {Elsevier},
    keyword = {Introduction} 
    }
    


Conference articles

  1. R.N.A. Henson, S.J. Kiebel, J. Kilner, K.J. Friston, A. Hillebrand, G. Rees, and K.D. Singh. Time-frequency SPMs for MEG data on face perception: power changes and phase-locking. In International Conference on Human Brain Mapping, 2005. [PDF] Keyword(s): MEG.
    @InProceedings{ rnah_time,
    author = {R.N.A. Henson and S.J. Kiebel and J. Kilner and K.J. Friston and A. Hillebrand and G. Rees and K.D. Singh},
    title = {Time-frequency {SPM}s for {MEG} data on face perception: power changes and phase-locking},
    booktitle = {{I}nternational {C}onference on {H}uman {B}rain {M}apping},
    year = {2005},
    keyword = {MEG},
    pdf = {/spm/doc/papers/hbm05-timefreq.pdf} 
    }
    


  2. R.N.A. Henson, J. Mattout, K.J. Friston, S.Hassel, A. Hillebrand, G. Rees, and K.D. Singh. Distributed source localisation of the M170 using multiple constraints. In International Conference on Human Brain Mapping, 2005. [PDF] Keyword(s): MEG.
    @InProceedings{ rnah_source,
    author = {R.N.A. Henson and J. Mattout and K.J. Friston and S.Hassel and A. Hillebrand and G. Rees and K.D. Singh},
    title = {Distributed source localisation of the {M170} using multiple constraints},
    booktitle = {{I}nternational {C}onference on {H}uman {B}rain {M}apping},
    year = {2005},
    keyword = {MEG},
    pdf = {/spm/doc/papers/hbm05-source.pdf} 
    }
    


  3. W.D. Penny and G. Flandin. Bayesian analysis of fMRI data with spatial priors. In Proceedings of the Joint Statistical Meeting (JSM), Section on Statistical Graphics [CDROM], 2005. Note: Alexandria, VA: American Statistical Association.[PDF] Keyword(s): PPM, Bayesian, fMRI.
    @InProceedings{ vb5,
    author = {W.D. Penny and G. Flandin},
    title = {Bayesian analysis of f{MRI} data with spatial priors},
    booktitle = {Proceedings of the Joint Statistical Meeting (JSM), Section on Statistical Graphics [CDROM]},
    note = {Alexandria, VA: American Statistical Association.},
    year = {2005},
    keyword = {PPM,Bayesian,fMRI},
    pdf = { /spm/doc/papers/vb5.pdf } 
    }
    


Internal reports

  1. W.D. Penny and G. Flandin. Bayesian analysis of single-subject fMRI: SPM implementation. Technical report, Wellcome Department of Imaging Neuroscience, 2005. [PDF] Keyword(s): PPM, Bayesian, fMRI.
    @TechReport{ vb3,
    author = {W.D. Penny and G. Flandin},
    title = {Bayesian analysis of single-subject {fMRI}: {SPM} implementation},
    institution = {Wellcome Department of Imaging Neuroscience},
    year = {2005},
    keyword = {PPM,Bayesian,fMRI},
    pdf = { /spm/doc/papers/vb3.pdf } 
    }
    


  2. K.E. Stephan, K.J. Friston, and W.D. Penny. Computing the objective function in DCM. Technical report, Wellcome Department of Imaging Neuroscience, ION, UCL, 2005. [PDF] Keyword(s): DCM.
    @TechReport{ klaas_dcm_objfcn,
    author = {K.E. Stephan and K.J. Friston and W.D. Penny},
    title = {Computing the objective function in {DCM}},
    institution = {Wellcome Department of Imaging Neuroscience, ION, UCL},
    year = {2005},
    pdf = {/spm/doc/papers/stephan_DCM_ObjFcn_tr05.pdf},
    keyword = {DCM} 
    }
    



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Last modified: Wed Nov 22 15:33:41 2023
Author: spm.

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