By members and collaborators of the Functional Imaging Laboratory


Publications of J. Daunizeau

Articles in journal, book chapters

  1. L. Rigoux, K.E. Stephan, K.J. Friston, and J. Daunizeau. Bayesian model selection for group studies -- Revisited. NeuroImage, 84:971-985, 2014. [WWW] [doi:10.1016/j.neuroimage.2013.08.065] [bibtex-entry]

  2. J. Daunizeau, L. Lemieux, A.E. Vaudano, K.J. Friston, and K.E. Stephan. An electrophysiological validation of stochastic DCM for fMRI. Frontiers in Computational Neuroscience, 6(103), 2013. [doi:10.3389/fncom.2012.00103] Keyword(s): DCM. [bibtex-entry]

  3. J. Daunizeau, K.E. Stephan, and K.J. Friston. Stochastic Dynamic Causal Modelling of fMRI data: should we care about neural noise?. NeuroImage, 62(1):464-481, 2012. [doi:10.1016/j.neuroimage.2012.04.061] Keyword(s): DCM. [bibtex-entry]

  4. J. Daunizeau, O. David, and K.E. Stephan. Dynamic causal modelling: A critical review of the biophysical and statistical foundations. NeuroImage, 58:312-322, 2011. [PDF] [doi:10.1016/j.neuroimage.2009.11.062] Keyword(s): DCM. [bibtex-entry]

  5. J. Daunizeau, K. Preuschoff, K.J. Friston, and K.E. Stephan. Optimizing experimental design for comparing models of brain function. PLoS Comp. Biol., 7(11):e1002280, 2011. [doi:10.1371/journal.pcbi.1002280] Keyword(s): DCM. [bibtex-entry]

  6. V. Litvak, J. Mattout, S.J. Kiebel, C. Phillips, R.N.A. Henson, J. Kilner, G. Barnes, R. Oostenveld, J. Daunizeau, G. Flandin, W.D. Penny, and K.J. Friston. EEG and MEG data analysis in SPM8. Comput. Intell. Neurosci., 2011(852961), 2011. [PDF] [doi:10.1155/2011/852961] Keyword(s): introduction, EEG, MEG. [bibtex-entry]

  7. J. Daunizeau, A.E. Vaudano, and L. Lemieux. Bayesian multi-modal model comparison: A case study on the generators of the spike and the wave in generalized spike-wave complexes. NeuroImage, 49(1):656-667, 2010. [doi:10.1016/j.neuroimage.2009.06.048] [bibtex-entry]

  8. J. Daunizeau, H.E.M den Ouden, M. Pessiglione, S.J. Kiebel, K.J. Friston, and K.E. Stephan. Observing the observer (II): deciding when to decide. Plos One, 5(12):e15555, 2010. [PDF] [doi:10.1371/journal.pone.0015555] Keyword(s): Bayesian. [bibtex-entry]

  9. J. Daunizeau, H.E.M den Ouden, M. Pessiglione, K.E. Stephan, S.J. Kiebel, and K.J. Friston. Observing the observer (I): meta-Bayesian models of learning and decision-making. Plos One, 5(12):e15554, 2010. [PDF] [doi:10.1371/journal.pone.0015554] Keyword(s): Bayesian. [bibtex-entry]

  10. K.J. Friston, J. Daunizeau, J. Kilner, and S.J. Kiebel. Action and behavior: a free-energy formulation. Biol. Cybern., 102(3):227-260, 2010. [PDF] [doi:10.1007/s00422-010-0364-z] Keyword(s): DEM. [bibtex-entry]

  11. K.J. Friston, B. Li, J. Daunizeau, and K.E. Stephan. Network discovery with DCM. NeuroImage, in press, 2010. [doi:10.1016/j.neuroimage.2010.12.039] Keyword(s): DCM. [bibtex-entry]

  12. K.J. Friston, K.E. Stephan, Baojuan Li, and J. Daunizeau. Generalised Filtering. Mathematical Problems in Engineering, 621670, 2010. [PDF] [doi:10.1155/2010/621670] Keyword(s): DEM. [bibtex-entry]

  13. W.D. Penny, K.E. Stephan, J. Daunizeau, M.J. Rosa, K.J. Friston, T.M.Schofield, and A.P. Leff. Comparing Families of Dynamic Causal Models. PLoS Comput Biol, 6(3):e1000709, 2010. [PDF] [doi:10.1371/journal.pcbi.1000709] [bibtex-entry]

  14. M.J. Rosa, J. Daunizeau, and K.J. Friston. EEG-fMRI integration : a critical review of biophysical modelling and data analysis approaches. J. Integrative Neurosci., 9(4):453-476, 2010. [bibtex-entry]

  15. K.E. Stephan, W.D. Penny, R. Moran, H.E. Den Ouden, J. Daunizeau, and K.J. Friston. Ten simple rules for dynamic causal modelling. NeuroImage, 49(4):3099-3109, 2010. [PDF] [doi:10.1016/j.neuroimage.2009.11.015] Keyword(s): DCM. [bibtex-entry]

  16. H. den Ouden, J. Daunizeau, J. Roiser, K.J. Friston, and K.E. Stephan. Striatal Prediction Error Modulates Cortical Coupling. Journal of Neuroscience, 30(9):3210-3219, 2010. [PDF] [doi:10.1523/JNEUROSCI.4458-09.2010] [bibtex-entry]

  17. J. Daunizeau, K.J. Friston, and S.J. Kiebel. Variational Bayesian identification and prediction of stochastic nonlinear dynamic causal models. Physica D: nonlinear phenomena, 238(21):2089-2118, 2009. [doi:10.1016/j.physd.2009.08.002] [bibtex-entry]

  18. J. Daunizeau, S.J. Kiebel, and K.J. Friston. Dynamic causal modelling of distributed electromagnetic responses. NeuroImage, 2009. [doi:10.1016/j.neuroimage.2009.04.062] Keyword(s): DCM, EEG, MEG. [bibtex-entry]

  19. K.J. Friston, J. Daunizeau, and S.J. Kiebel. Reinforcement Learning or Active Inference?. PLOS One, 4(7):e6421, 2009. [PDF] [doi:10.1371/journal.pone.0006421] Keyword(s): DEM. [bibtex-entry]

  20. K.E. Stephan, W.D. Penny, J. Daunizeau, R. Moran, and K.J. Friston. Bayesian model selection for group studies. NeuroImage, 46(3):1004-10174, 2009. [PDF] [doi:10.1016/j.neuroimage.2009.03.025] Keyword(s): DCM, BMC, Bayesian, group. [bibtex-entry]

  21. K.J. Friston, L. Harrison, J. Daunizeau, S.J. Kiebel, C. Phillips, N. Trujillo-Bareto, R.N.A. Henson, G. Flandin, and J. Mattout. Multiple sparse priors for the M/EEG inverse problem. NeuroImage, 39(3):1104-1120, 2008. [doi:10.1016/j.neuroimage.2007.09.048] Keyword(s): EEG, MEG. [bibtex-entry]

  22. K.J. Friston, N. Trujillo-Bareto, and J. Daunizeau. DEM: A variational treatment of dynamic systems. NeuroImage, 41(3):849-885, 2008. [PDF] [doi:10.1016/j.neuroimage.2008.02.054] Keyword(s): DEM. [bibtex-entry]

  23. L. Harrison, W.D. Penny, J. Daunizeau, and K.J. Friston. Diffusion-based spatial priors for functional magnetic resonance images. NeuroImage, 41(2):408-423, 2008. [doi:10.1016/j.neuroimage.2008.02.005] Keyword(s): fMRI, spatial, bayesian. [bibtex-entry]

  24. S.J. Kiebel, J. Daunizeau, C. Phillips, and K.J. Friston. Variational Bayesian inversion of the equivalent current dipole model in EEG/MEG. NeuroImage, 39(2):728-741, 2008. [doi:10.1016/j.neuroimage.2007.09.005] [bibtex-entry]

  25. A.C. Marreiros, J. Daunizeau, S.J. Kiebel, and K.J. Friston. Population dynamics: Variance and the sigmoid activation function. NeuroImage, 42(1):147-157, 2008. [doi:10.1016/j.neuroimage.2008.04.239] Keyword(s): DCM, EEG. [bibtex-entry]

  26. A.C. Marreiros, S.J. Kiebel, J. Daunizeau, L. Harrison, and K.J. Friston. Population dynamics under the Laplace assumption. NeuroImage, 2008. [doi:10.1016/j.neuroimage.2008.10.008] [bibtex-entry]

  27. K.E. Stephan, L. Kasper, L. Harrison, J. Daunizeau, H. den Ouden, M. Breakspear, and K.J. Friston. Nonlinear Dynamic Causal Models for FMRI. NeuroImage, 42(2):649-662, 2008. [PDF] [doi:10.1016/j.neuroimage.2008.04.262] Keyword(s): DCM, fMRI. [bibtex-entry]

  28. J. Daunizeau and K.J. Friston. A mesostate-space model for EEG and MEG. NeuroImage, 38(1):67-81, 2007. [doi:10.1016/j.neuroimage.2007.06.034] Keyword(s): EEG, MEG. [bibtex-entry]

  29. R. Moran, S.J. Kiebel, K.E. Stephan, R.B. Reilly, J. Daunizeau, and K.J. Friston. A neural mass model of spectral responses in electrophysiology. NeuroImage, 37(3):706-720, 2007. [PDF] [doi:10.1016/j.neuroimage.2007.05.032] Keyword(s): EEG. [bibtex-entry]



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Last modified: Wed Nov 22 15:33:42 2023
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