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By members and collaborators of the Functional Imaging Laboratory


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Publications of J. Daunizeau

Articles in journal, book chapters

  1. L. Rigoux, K.E. Stephan, K.J. Friston, and J. Daunizeau. Bayesian model selection for group studies -- Revisited. NeuroImage, 84:971-985, 2014. [WWW] [doi:10.1016/j.neuroimage.2013.08.065] [bibtex-entry]


  2. J. Daunizeau, L. Lemieux, A.E. Vaudano, K.J. Friston, and K.E. Stephan. An electrophysiological validation of stochastic DCM for fMRI. Frontiers in Computational Neuroscience, 6(103), 2013. [doi:10.3389/fncom.2012.00103] Keyword(s): DCM. [bibtex-entry]


  3. J. Daunizeau, K.E. Stephan, and K.J. Friston. Stochastic Dynamic Causal Modelling of fMRI data: should we care about neural noise?. NeuroImage, 62(1):464-481, 2012. [doi:10.1016/j.neuroimage.2012.04.061] Keyword(s): DCM. [bibtex-entry]


  4. J. Daunizeau, O. David, and K.E. Stephan. Dynamic causal modelling: A critical review of the biophysical and statistical foundations. NeuroImage, 58:312-322, 2011. [PDF] [doi:10.1016/j.neuroimage.2009.11.062] Keyword(s): DCM. [bibtex-entry]


  5. J. Daunizeau, K. Preuschoff, K.J. Friston, and K.E. Stephan. Optimizing experimental design for comparing models of brain function. PLoS Comp. Biol., 7(11):e1002280, 2011. [doi:10.1371/journal.pcbi.1002280] Keyword(s): DCM. [bibtex-entry]


  6. V. Litvak, J. Mattout, S.J. Kiebel, C. Phillips, R.N.A. Henson, J. Kilner, G. Barnes, R. Oostenveld, J. Daunizeau, G. Flandin, W.D. Penny, and K.J. Friston. EEG and MEG data analysis in SPM8. Comput. Intell. Neurosci., 2011(852961), 2011. [PDF] [doi:10.1155/2011/852961] Keyword(s): introduction, EEG, MEG. [bibtex-entry]


  7. J. Daunizeau, A.E. Vaudano, and L. Lemieux. Bayesian multi-modal model comparison: A case study on the generators of the spike and the wave in generalized spike-wave complexes. NeuroImage, 49(1):656-667, 2010. [doi:10.1016/j.neuroimage.2009.06.048] [bibtex-entry]


  8. J. Daunizeau, H.E.M den Ouden, M. Pessiglione, S.J. Kiebel, K.J. Friston, and K.E. Stephan. Observing the observer (II): deciding when to decide. Plos One, 5(12):e15555, 2010. [PDF] [doi:10.1371/journal.pone.0015555] Keyword(s): Bayesian. [bibtex-entry]


  9. J. Daunizeau, H.E.M den Ouden, M. Pessiglione, K.E. Stephan, S.J. Kiebel, and K.J. Friston. Observing the observer (I): meta-Bayesian models of learning and decision-making. Plos One, 5(12):e15554, 2010. [PDF] [doi:10.1371/journal.pone.0015554] Keyword(s): Bayesian. [bibtex-entry]


  10. K.J. Friston, J. Daunizeau, J. Kilner, and S.J. Kiebel. Action and behavior: a free-energy formulation. Biol. Cybern., 102(3):227-260, 2010. [PDF] [doi:10.1007/s00422-010-0364-z] Keyword(s): DEM. [bibtex-entry]


  11. K.J. Friston, B. Li, J. Daunizeau, and K.E. Stephan. Network discovery with DCM. NeuroImage, in press, 2010. [doi:10.1016/j.neuroimage.2010.12.039] Keyword(s): DCM. [bibtex-entry]


  12. K.J. Friston, K.E. Stephan, Baojuan Li, and J. Daunizeau. Generalised Filtering. Mathematical Problems in Engineering, 621670, 2010. [PDF] [doi:10.1155/2010/621670] Keyword(s): DEM. [bibtex-entry]


  13. W.D. Penny, K.E. Stephan, J. Daunizeau, M.J. Rosa, K.J. Friston, T.M.Schofield, and A.P. Leff. Comparing Families of Dynamic Causal Models. PLoS Comput Biol, 6(3):e1000709, 2010. [PDF] [doi:10.1371/journal.pcbi.1000709] [bibtex-entry]


  14. M.J. Rosa, J. Daunizeau, and K.J. Friston. EEG-fMRI integration : a critical review of biophysical modelling and data analysis approaches. J. Integrative Neurosci., 9(4):453-476, 2010. [bibtex-entry]


  15. K.E. Stephan, W.D. Penny, R. Moran, H.E. Den Ouden, J. Daunizeau, and K.J. Friston. Ten simple rules for dynamic causal modelling. NeuroImage, 49(4):3099-3109, 2010. [PDF] [doi:10.1016/j.neuroimage.2009.11.015] Keyword(s): DCM. [bibtex-entry]


  16. H. den Ouden, J. Daunizeau, J. Roiser, K.J. Friston, and K.E. Stephan. Striatal Prediction Error Modulates Cortical Coupling. Journal of Neuroscience, 30(9):3210-3219, 2010. [PDF] [doi:10.1523/JNEUROSCI.4458-09.2010] [bibtex-entry]


  17. J. Daunizeau, K.J. Friston, and S.J. Kiebel. Variational Bayesian identification and prediction of stochastic nonlinear dynamic causal models. Physica D: nonlinear phenomena, 238(21):2089-2118, 2009. [doi:10.1016/j.physd.2009.08.002] [bibtex-entry]


  18. J. Daunizeau, S.J. Kiebel, and K.J. Friston. Dynamic causal modelling of distributed electromagnetic responses. NeuroImage, 2009. [doi:10.1016/j.neuroimage.2009.04.062] Keyword(s): DCM, EEG, MEG. [bibtex-entry]


  19. K.J. Friston, J. Daunizeau, and S.J. Kiebel. Reinforcement Learning or Active Inference?. PLOS One, 4(7):e6421, 2009. [PDF] [doi:10.1371/journal.pone.0006421] Keyword(s): DEM. [bibtex-entry]


  20. K.E. Stephan, W.D. Penny, J. Daunizeau, R. Moran, and K.J. Friston. Bayesian model selection for group studies. NeuroImage, 46(3):1004-10174, 2009. [PDF] [doi:10.1016/j.neuroimage.2009.03.025] Keyword(s): DCM, BMC, Bayesian, group. [bibtex-entry]


  21. K.J. Friston, L. Harrison, J. Daunizeau, S.J. Kiebel, C. Phillips, N. Trujillo-Bareto, R.N.A. Henson, G. Flandin, and J. Mattout. Multiple sparse priors for the M/EEG inverse problem. NeuroImage, 39(3):1104-1120, 2008. [doi:10.1016/j.neuroimage.2007.09.048] Keyword(s): EEG, MEG. [bibtex-entry]


  22. K.J. Friston, N. Trujillo-Bareto, and J. Daunizeau. DEM: A variational treatment of dynamic systems. NeuroImage, 41(3):849-885, 2008. [PDF] [doi:10.1016/j.neuroimage.2008.02.054] Keyword(s): DEM. [bibtex-entry]


  23. L. Harrison, W.D. Penny, J. Daunizeau, and K.J. Friston. Diffusion-based spatial priors for functional magnetic resonance images. NeuroImage, 41(2):408-423, 2008. [doi:10.1016/j.neuroimage.2008.02.005] Keyword(s): fMRI, spatial, bayesian. [bibtex-entry]


  24. S.J. Kiebel, J. Daunizeau, C. Phillips, and K.J. Friston. Variational Bayesian inversion of the equivalent current dipole model in EEG/MEG. NeuroImage, 39(2):728-741, 2008. [doi:10.1016/j.neuroimage.2007.09.005] [bibtex-entry]


  25. A.C. Marreiros, J. Daunizeau, S.J. Kiebel, and K.J. Friston. Population dynamics: Variance and the sigmoid activation function. NeuroImage, 42(1):147-157, 2008. [doi:10.1016/j.neuroimage.2008.04.239] Keyword(s): DCM, EEG. [bibtex-entry]


  26. A.C. Marreiros, S.J. Kiebel, J. Daunizeau, L. Harrison, and K.J. Friston. Population dynamics under the Laplace assumption. NeuroImage, 2008. [doi:10.1016/j.neuroimage.2008.10.008] [bibtex-entry]


  27. K.E. Stephan, L. Kasper, L. Harrison, J. Daunizeau, H. den Ouden, M. Breakspear, and K.J. Friston. Nonlinear Dynamic Causal Models for FMRI. NeuroImage, 42(2):649-662, 2008. [PDF] [doi:10.1016/j.neuroimage.2008.04.262] Keyword(s): DCM, fMRI. [bibtex-entry]


  28. J. Daunizeau and K.J. Friston. A mesostate-space model for EEG and MEG. NeuroImage, 38(1):67-81, 2007. [doi:10.1016/j.neuroimage.2007.06.034] Keyword(s): EEG, MEG. [bibtex-entry]


  29. R. Moran, S.J. Kiebel, K.E. Stephan, R.B. Reilly, J. Daunizeau, and K.J. Friston. A neural mass model of spectral responses in electrophysiology. NeuroImage, 37(3):706-720, 2007. [PDF] [doi:10.1016/j.neuroimage.2007.05.032] Keyword(s): EEG. [bibtex-entry]



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Last modified: Wed Nov 22 15:33:42 2023
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