By members and collaborators of the Functional Imaging Laboratory


Publications of K.E. Stephan

Articles in journal, book chapters

  1. L. Rigoux, K.E. Stephan, K.J. Friston, and J. Daunizeau. Bayesian model selection for group studies -- Revisited. NeuroImage, 84:971-985, 2014. [WWW] [doi:10.1016/j.neuroimage.2013.08.065] [bibtex-entry]

  2. J. Daunizeau, L. Lemieux, A.E. Vaudano, K.J. Friston, and K.E. Stephan. An electrophysiological validation of stochastic DCM for fMRI. Frontiers in Computational Neuroscience, 6(103), 2013. [doi:10.3389/fncom.2012.00103] Keyword(s): DCM. [bibtex-entry]

  3. K.E. Stephan. The history of CoCoMac. NeuroImage, 80:46-52, 2013. [WWW] [doi:10.1016/j.neuroimage.2013.03.016] Keyword(s): connectivity. [bibtex-entry]

  4. J. Daunizeau, K.E. Stephan, and K.J. Friston. Stochastic Dynamic Causal Modelling of fMRI data: should we care about neural noise?. NeuroImage, 62(1):464-481, 2012. [doi:10.1016/j.neuroimage.2012.04.061] Keyword(s): DCM. [bibtex-entry]

  5. K.J. Friston, A. Bastos, V. Litvak, K.E. Stephan, P. Fries, and R. Moran. DCM for complex-valued data: Cross-spectra, coherence and phase-delays. NeuroImage, 59(1):439-455, 2012. [doi:10.1016/j.neuroimage.2011.07.048] [bibtex-entry]

  6. Kay H. Brodersen, Florent Haiss, Cheng Soon Ong, Fabienne Jung, Marc Tittgemeyer, Joachim M. Buhmann, Bruno Weber, and K.E. Stephan. Model-based feature construction for multivariate decoding. NeuroImage, 56(2):601-615, 2011. [PDF] [doi:10.1016/j.neuroimage.2010.04.036] [bibtex-entry]

  7. K.H Brodersen, T.M. Schofield, A.P. Leff, C.S. Ong, E.I. Lomakina, J.M. Buhmann, and K.E. Stephan. Generative Embedding for Model-Based Classification of fMRI Data. PLOS Computational Biology, 7(6):e1002079, 2011. [PDF] [doi:10.1371/journal.pcbi.1002079] Keyword(s): DCM. [bibtex-entry]

  8. J. Daunizeau, O. David, and K.E. Stephan. Dynamic causal modelling: A critical review of the biophysical and statistical foundations. NeuroImage, 58:312-322, 2011. [PDF] [doi:10.1016/j.neuroimage.2009.11.062] Keyword(s): DCM. [bibtex-entry]

  9. J. Daunizeau, K. Preuschoff, K.J. Friston, and K.E. Stephan. Optimizing experimental design for comparing models of brain function. PLoS Comp. Biol., 7(11):e1002280, 2011. [doi:10.1371/journal.pcbi.1002280] Keyword(s): DCM. [bibtex-entry]

  10. R. Moran, K.E. Stephan, R. Dolan, and K.J. Friston. Neural fields, spectral responses and lateral connections. NeuroImage, 55(4):1694-1708, 2011. [WWW] [doi:10.1016/j.neuroimage.2011.01.012] [bibtex-entry]

  11. J. Daunizeau, H.E.M den Ouden, M. Pessiglione, S.J. Kiebel, K.J. Friston, and K.E. Stephan. Observing the observer (II): deciding when to decide. Plos One, 5(12):e15555, 2010. [PDF] [doi:10.1371/journal.pone.0015555] Keyword(s): Bayesian. [bibtex-entry]

  12. J. Daunizeau, H.E.M den Ouden, M. Pessiglione, K.E. Stephan, S.J. Kiebel, and K.J. Friston. Observing the observer (I): meta-Bayesian models of learning and decision-making. Plos One, 5(12):e15554, 2010. [PDF] [doi:10.1371/journal.pone.0015554] Keyword(s): Bayesian. [bibtex-entry]

  13. K.J. Friston, B. Li, J. Daunizeau, and K.E. Stephan. Network discovery with DCM. NeuroImage, in press, 2010. [doi:10.1016/j.neuroimage.2010.12.039] Keyword(s): DCM. [bibtex-entry]

  14. K.J. Friston, K.E. Stephan, Baojuan Li, and J. Daunizeau. Generalised Filtering. Mathematical Problems in Engineering, 621670, 2010. [PDF] [doi:10.1155/2010/621670] Keyword(s): DEM. [bibtex-entry]

  15. C.H. Kasess, K.E. Stephan, A. Weissenbacher, L. Pezawas, E. Moser, and C. Windischberger. Multi-Subject Analyses with Dynamic Causal Modeling. NeuroImage, 49(4):3065-3074, 2010. [doi:10.1016/j.neuroimage.2009.11.037] [bibtex-entry]

  16. W.D. Penny, K.E. Stephan, J. Daunizeau, M.J. Rosa, K.J. Friston, T.M.Schofield, and A.P. Leff. Comparing Families of Dynamic Causal Models. PLoS Comput Biol, 6(3):e1000709, 2010. [PDF] [doi:10.1371/journal.pcbi.1000709] [bibtex-entry]

  17. K.E. Stephan and K.J. Friston. Analyzing effective connectivity with functional magnetic resonance imaging. WIREs Cognitive Sience, 1:446-459, 2010. [PDF] [doi:10.1002/wcs.58] Keyword(s): DCM, fMRI. [bibtex-entry]

  18. K.E. Stephan, W.D. Penny, R. Moran, H.E. Den Ouden, J. Daunizeau, and K.J. Friston. Ten simple rules for dynamic causal modelling. NeuroImage, 49(4):3099-3109, 2010. [PDF] [doi:10.1016/j.neuroimage.2009.11.015] Keyword(s): DCM. [bibtex-entry]

  19. H. den Ouden, J. Daunizeau, J. Roiser, K.J. Friston, and K.E. Stephan. Striatal Prediction Error Modulates Cortical Coupling. Journal of Neuroscience, 30(9):3210-3219, 2010. [PDF] [doi:10.1523/JNEUROSCI.4458-09.2010] [bibtex-entry]

  20. C.C. Chen, R.N.A. Henson, K.E. Stephan, J. Kilner, and K.J. Friston. Forward and backward connections in the brain: A DCM study of functional asymmetries. NeuroImage, 45(2):453-462, 2009. [doi:10.1016/j.neuroimage.2008.12.041] Keyword(s): DCM, MEG. [bibtex-entry]

  21. R. Moran, K.E. Stephan, T. Seidenbecher, H.C. Pape, R. Dolan, and K.J. Friston. Dynamic causal models of steady-state responses. NeuroImage, 44(3):796-811, 2009. [doi:10.1016/j.neuroimage.2008.09.048] Keyword(s): DCM. [bibtex-entry]

  22. K.E. Stephan, K.J. Friston, and C. Frith. Dysconnection in Schizophrenia: From Abnormal Synaptic Plasticity to Failures of Self-monitoring. Schizophrenia Bulletin, 35(3):509-527, 2009. [PDF] [doi:10.1093/schbul/sbn176] [bibtex-entry]

  23. K.E. Stephan, W.D. Penny, J. Daunizeau, R. Moran, and K.J. Friston. Bayesian model selection for group studies. NeuroImage, 46(3):1004-10174, 2009. [PDF] [doi:10.1016/j.neuroimage.2009.03.025] Keyword(s): DCM, BMC, Bayesian, group. [bibtex-entry]

  24. K.E. Stephan, M. Tittgemeyer, T.R. Knosche, R. Moran, and K.J. Friston. Tractography-based priors for dynamic causal models. NeuroImage, 47(1):1628-1638, 2009. [PDF] [doi:10.1016/j.neuroimage.2009.05.096] [bibtex-entry]

  25. M.I. Garrido, K.J. Friston, K.E. Stephan, S.J. Kiebel, T. Baldeweg, and J. Kilner. The functional anatomy of the MMN: A DCM study of the roving paradigm. NeuroImage, 42(2):936-944, 2008. [PDF] [doi:10.1016/j.neuroimage.2008.05.018] Keyword(s): DCM, EEG. [bibtex-entry]

  26. K.E. Stephan, L. Kasper, L. Harrison, J. Daunizeau, H. den Ouden, M. Breakspear, and K.J. Friston. Nonlinear Dynamic Causal Models for FMRI. NeuroImage, 42(2):649-662, 2008. [PDF] [doi:10.1016/j.neuroimage.2008.04.262] Keyword(s): DCM, fMRI. [bibtex-entry]

  27. K.E. Stephan, J.J. Riera, G. Deco, and B. Horwitz. The Brain Connectivity Workshops: Moving the frontiers of computational systems neuroscience. NeuroImage, 42(1):1-9, 2008. [PDF] [doi:10.1016/j.neuroimage.2008.04.167] Keyword(s): DCM. [bibtex-entry]

  28. M.I. Garrido, J. Kilner, S.J. Kiebel, K.E. Stephan, and K.J. Friston. Dynamic causal modelling of evoked potentials: A reproducibility study. NeuroImage, 36:571-580, 2007. [PDF] [doi:10.1016/j.neuroimage.2007.03.014] Keyword(s): DCM, EEG, MEG. [bibtex-entry]

  29. R. Moran, S.J. Kiebel, K.E. Stephan, R.B. Reilly, J. Daunizeau, and K.J. Friston. A neural mass model of spectral responses in electrophysiology. NeuroImage, 37(3):706-720, 2007. [PDF] [doi:10.1016/j.neuroimage.2007.05.032] Keyword(s): EEG. [bibtex-entry]

  30. K.E. Stephan, L. Harrison, S.J. Kiebel, O. David, W.D. Penny, and K.J. Friston. Dynamic causal models of neural system dynamics: current state and future extensions. Journal of Biosciences, pp 129-144, 2007. [PDF] Keyword(s): DCM, fMRI. [bibtex-entry]

  31. K.E. Stephan, J.C. Marshall, W.D. Penny, K.J. Friston, and G.R. Fink. Interhemispheric integration of visual processing during task-driven lateralization. Journal of Neuroscience, 27:3512-3522, 2007. [PDF] Keyword(s): DCM, fMRI. [bibtex-entry]

  32. K.E. Stephan, N. Weiskopf, P.M. Drysdale, P.A. Robinson, and K.J. Friston. Comparing hemodynamic models with DCM. NeuroImage, 38:387-401, 2007. [PDF] [doi:10.1016/j.neuroimage.2007.07.040] Keyword(s): DCM, bayesian. [bibtex-entry]

  33. K.J. Friston, K.E. Stephan, T.E. Lund, A. Morcom, and S.J. Kiebel. Mixed-effects and fMRI studies. NeuroImage, 24:244-252, 2005. [PDF] Keyword(s): fMRI, GLM. [bibtex-entry]

  34. K.E. Stephan, W.D. Penny, J.C. Marshall, G.R. Fink, and K.J. Friston. Investigating the functional role of Callosal connections with Dynamic Causal Models. Ann. N.Y. Acad. Sci., 1064:16-36, 2005. [PDF] [doi:10.1196/annals.1340.008] Keyword(s): DCM. [bibtex-entry]

  35. W.D. Penny, K.E. Stephan, A. Mechelli, and K.J. Friston. Comparing Dynamic Causal Models. NeuroImage, 22(3):1157-1172, 2004. [PDF] Keyword(s): Bayesian, connectivity, fMRI, DCM, BMC. [bibtex-entry]

  36. W.D. Penny, K.E. Stephan, A. Mechelli, and K.J. Friston. Modelling Functional Integration: A Comparison of Structural Equation and Dynamic Causal and Models. NeuroImage, 23:264-274, 2004. Note: Supplement 1. [PDF] Keyword(s): introduction, connectivity, DCM. [bibtex-entry]

  37. K.E. Stephan. On the role of general system theory for functional neuroimaging. Journal of Anatomy, 205:443-470, 2004. [PDF] Keyword(s): DCM. [bibtex-entry]

  38. K.E. Stephan, L. Harrison, W.D. Penny, and K.J. Friston. Biophysical models of fMRI responses. Current Opinion in Neurobiology, 14(5):629-635, 2004. [PDF] [bibtex-entry]

Conference articles

  1. R. Moran, K.E. Stephan, F. Jung, R. Graf, R. Dolan, K.J. Friston, and M. Tittgemeyer. DCM for Steady State Responses: a case study of anaesthesia dept. In Proc Soc for Neuroscience, 2009. [bibtex-entry]

Internal reports

  1. K.E. Stephan, K.J. Friston, and W.D. Penny. Computing the objective function in DCM. Technical report, Wellcome Department of Imaging Neuroscience, ION, UCL, 2005. [PDF] Keyword(s): DCM. [bibtex-entry]



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Last modified: Wed Nov 22 15:33:42 2023
Author: spm.

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