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Publications about 'fMRI'

Articles in journal or book chapters

  1. L. Harrison, W.D. Penny, J. Daunizeau, and K.J. Friston. Diffusion-based spatial priors for functional magnetic resonance images. NeuroImage, 41(2):408-423, 2008. Keyword(s): fMRI, spatial, bayesian. [bibtex-entry]


  2. L M Harrison, W Penny, J Daunizeau, and K J Friston. Diffusion-based spatial priors for functional magnetic resonance images.. Neuroimage, 41(2):408-23, 2008. Keyword(s): fMRI. [bibtex-entry]


  3. L M Harrison, W Penny, G Flandin, C C Ruff, N Weiskopf, and K J Friston. Graph-partitioned spatial priors for functional magnetic resonance images.. Neuroimage, 43(4):694-707, 2008. Keyword(s): fMRI. [bibtex-entry]


  4. L. Harrison, W.D. Penny, G. Flandin, C. Ruff, N. Weiskopf, and K.J. Friston. Sparse diffusion-based spatial models for functional magnetic resonance images. NeuroImage, 2008. Keyword(s): fMRI, spatial. [bibtex-entry]


  5. G. Flandin and W.D. Penny. Bayesian fMRI data analysis with sparse spatial basis function priors. NeuroImage, 34(3):1108-1125, 2007. Keyword(s): PPM, Bayesian, fMRI, GLM, spatial, hierarchical. [bibtex-entry]


  6. L. Harrison, W.D. Penny, J. Ashburner, N. Trujillo-Bareto, and K.J. Friston. Diffusion-based spatial priors for imaging. NeuroImage, 38:677-695, 2007. Keyword(s): fMRI, GLM, spatial. [bibtex-entry]


  7. W. D. Penny, G. Flandin, and N. Trujillo-Barreto. Bayesian comparison of spatially regularised general linear models. Human Brain Mapping, 28(4):275-293, 2007. Keyword(s): fMRI, GLM. [bibtex-entry]


  8. W.D. Penny and K.J. Friston. Functional Imaging. Scholarpedia, 2(5):1478, 2007. Keyword(s): fMRI, EEG, MEG, introduction. [bibtex-entry]


  9. W. D. Penny and K.J. Friston. Functional Imaging. Scholarpedia, 2(5):1478, 2007. Keyword(s): fMRI, EEG, MEG. [bibtex-entry]


  10. W. D. Penny, J. Kilner, and F. Blankenburg. Robust Bayesian General Linear Models. Neuroimage, 36(3):661-671, 2007. Keyword(s): fMRI, GLM. [bibtex-entry]


  11. K.E. Stephan, L. Harrison, S.J. Kiebel, O. David, W.D. Penny, and K.J. Friston. Dynamic causal models of neural system dynamics: current state and future extensions. Journal of Biosciences, pp 129-144, 2007. Keyword(s): DCM, fMRI. [bibtex-entry]


  12. K.E. Stephan, L.M. Harrison, S.J. Kiebel, O. David, W.D. Penny, and K.J. Friston. Dynamic causal models of neural system dynamics: current state and future extensions. Journal of Biosciences, 32:411-416, 2007. Keyword(s): fMRI, Dynamic. [bibtex-entry]


  13. K.E. Stephan, J.C. Marshall, W.D. Penny, K.J. Friston, and G.R. Fink. Interhemispheric integration of visual processing during task-driven lateralization. Journal of Neuroscience, 27:3512-3522, 2007. Keyword(s): DCM, fMRI. [bibtex-entry]


  14. K.E. Stephan, J.C. Marshall, W. D. Penny, K.J. Friston, and G.R. Fink. Interhemispheric integration of visual processing during task-driven lateralization. Journal of Neuroscience, 32(1):129-144, 2007. Keyword(s): fMRI, DCM. [bibtex-entry]


  15. W. Penny, G. Flandin, and N. Trujillo-Barreto. Spatio-temporal models for fMRI. In K. Friston, J. Ashburner, S. Kiebel, T. Nichols, and W. Penny, editors, Statistical Parametric Mapping: The analysis of functional brain images. Elsevier, London, 2006. Keyword(s): fMRI, Spatial, GLM. [bibtex-entry]


  16. W.D. Penny and K. J. Friston. Bayesian Treatments of Neuroimaging Data. In K. Doya and I. Naguno, editors, The Bayesian Brain. 2006. Keyword(s): fMRI, Dynamic. [bibtex-entry]


  17. U. Noppeney and W.D. Penny. Two approaches to repetition suppression. Human Brain Mapping, 27:411-416, 2006. Keyword(s): fMRI. [bibtex-entry]


  18. U. Noppeney and W. D. Penny. Two approaches to repetition suppression. Human Brain Mapping, 27:411-416, 2006. Keyword(s): fMRI, Mixture. [bibtex-entry]


  19. U. Noppeney, W. D. Penny, C. J. Price, G. Flandin, and K. J. Friston. Identification of degenerate neuronal systems based on intersubject variability. Neuroimage, 30:885-890, 2006. Keyword(s): fMRI, Mixture. [bibtex-entry]


  20. W.D. Penny, G. Flandin, and N. Trujillo-Bareto. Bayesian Comparison of Spatially Regularised General Linear Models. Human Brain Mapping, 28:275-293, 2005. Keyword(s): Bayesian, fMRI, PPM, GLM. [bibtex-entry]


  21. W.D. Penny, Z. Ghahramani, and K.J. Friston. Bilinear Dynamical Systems. Phil Trans R Soc B, 360(1457):983-993, 2005. Keyword(s): Dynamic, Markov, fMRI. [bibtex-entry]


  22. W.D. Penny, N. Trujillo-Bareto, and K.J. Friston. Bayesian fMRI time series analysis with spatial priors. NeuroImage, 24(2):350-362, 2005. Keyword(s): Spatial, fMRI. [bibtex-entry]


  23. K.E. Stephan, W.D. Penny, J.C. Marshall, G.R. Fink, and K.J. Friston. Investigating the functional role of callosal connections by dynamic causal models. Annals of the New York Academy of Sciences, 1064:16-36, 2005. Keyword(s): DCM, fMRI. [bibtex-entry]


  24. W.D. Penny and K.J. Friston. Classical and Bayesian Iinference in fMRI. In L. Landini, editor, Advanced Image Processing in Magnetic Resonance Imaging. Marcel Dekker, 2004. Keyword(s): introduction. [bibtex-entry]


  25. W.D. Penny, K.E. Stephan, A. Mechelli, and K.J. Friston. Comparing Dynamic Causal Models. NeuroImage, 22(3):1157-1172, 2004. Keyword(s): Bayesian, connectivity, fMRI, DCM, BMC. [bibtex-entry]


  26. K.E. Stephan, L. Harrison, W.D. Penny, and K.J. Friston. Biophysical models of fMRI responses. Current Opinion in Neurobiology, 14(5):629-635, 2004. [bibtex-entry]


  27. W.D. Penny and K.J. Friston. Classical and Bayesian inference. In R.S.J. Frackowiak, K.J. Friston, C. Frith, R. Dolan, K.J. Friston, C.J. Price, S. Zeki, J. Ashburner, and W.D. Penny, editors, Human Brain Function. Academic Press, 2nd edition, 2003. Keyword(s): Bayesian, fMRI, hierarchical, nonsphericity, PPM, REML. [bibtex-entry]


  28. K.J. Friston, L. Harrison, and W.D. Penny. Dynamic Causal Modelling. NeuroImage, 19(4):1273-1302, 2003. Keyword(s): connectivity, fMRI, DCM. [bibtex-entry]


  29. D.R. Gitelman, W.D. Penny, J. Ashburner, and K.J. Friston. Modeling regional and psychophysiologic interactions in fMRI: the importance of hemodynamic deconvolution. NeuroImage, 19:200-207, 2003. Keyword(s): connectivity, fMRI, PPI. [bibtex-entry]


  30. L. Harrison, W.D. Penny, and K.J. Friston. Multivariate Autoregressive Modelling of fMRI time series. NeuroImage, 19(4):1477-1491, 2003. [bibtex-entry]


  31. W.D. Penny and K.J. Friston. Mixtures of General Linear Models for Functional Neuroimaging. IEEE Transactions on Medical Imaging, 22(4):504-514, 2003. Keyword(s): Mixture, GLM, Bayesian, fMRI, spatial, EM. [bibtex-entry]


  32. W.D. Penny, S.J. Kiebel, and K.J. Friston. Variational Bayesian Inference for fMRI time series. NeuroImage, 19(3):727-741, 2003. Keyword(s): autocorrelation, Bayesian, fMRI, PPM. [bibtex-entry]


Conference articles

  1. W.D. Penny and G. Flandin. Bayesian analysis of fMRI data with spatial priors. In Proceedings of the Joint Statistical Meeting (JSM), Section on Statistical Graphics [CDROM], 2005. Note: Alexandria, VA: American Statistical Association. Keyword(s): PPM, Bayesian, fMRI. [bibtex-entry]


Internal reports

  1. W.D. Penny and G. Flandin. Bayesian analysis of single-subject fMRI: SPM implementation. Technical report, Wellcome Department of Imaging Neuroscience, 2005. Keyword(s): PPM, Bayesian, fMRI. [bibtex-entry]


  2. W.D. Penny. Wavelet smoothing of fMRI activation images. Technical report, Wellcome Department of Imaging Neuroscience, ION, UCL, 2002. Keyword(s): fMRI, spatial. [bibtex-entry]



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Last modified: Tue Feb 17 16:23:58 2009
Author: wpenny.

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