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Articles in journal, book chapters

Rick Adams,
Markus Bauer,
Dimitris Pinotsis,
and K.J. Friston.
Dynamic causal modelling of pursuit eye movements: a physiological validation with MEG.
NeuroImage,
132:175189,
2016.
Keyword(s): DCM.
[bibtexentry]

Dimitris Pinotsis,
J.P. Geerts,
L. Pinto,
T.H.B. FitzGerald,
V. Litvak,
R. Auksztulewicz,
and K.J. Friston.
Linking canonical microcircuits and neuronal activity: Dynamic Causal Modelling of Laminar Recordings.
NeuroImage,
2016.
[bibtexentry]

Dimitris Pinotsis,
R. Loonis,
A. Bastos,
E.K. Miller,
and K.J. Friston.
Bayesian modelling of induced responses and neuronal rhythms.
Brain Topography,
2016.
[bibtexentry]

Dimitris Pinotsis,
G. Perry,
V. Litvak,
K. Singh,
and K.J. Friston.
Intersubject variability of induced gamma in the visual cortex: DCM with empirical Bayes and neural fields.
Human Brain Mapping,
2016.
Keyword(s): DCM.
[bibtexentry]

K.J. Friston,
A.M. Bastos,
D.A. Pinotsis,
and V. Litvak.
LFP and oscillations  what do they tell us?.
Current Opinion in Neurobiology,
31:16,
2015.
[bibtexentry]

D.G. Wakeman and R.N.A. Henson.
A multisubject, multimodal human neuroimaging dataset.
Scientific Data,
2(150001),
2015.
[bibtexentry]

G. Flandin and K.J. Friston.
Topological Inference.
In Arthur W. Toga, editor, Brain Mapping: an Encyclopedic Reference,
pages 495500.
Academic Press,
2015.
Keyword(s): FDR,
RFT,
topological.
[bibtexentry]

K.J. Friston,
J. Kahan,
B. Biswal,
and A. Razi.
A DCM for resting state fMRI.
NeuroImage,
2014.
[bibtexentry]

D.A. Pinotsis and K.J. Friston.
Extracting novel information from neuroimaging data using neural fields.
EPJ Nonlinear Biomedical Physics,
2(5),
2014.
[bibtexentry]

D.A. Pinotsis and K.J. Friston.
Gamma oscillations and neural field DCMs can reveal cortical excitability and microstructure.
AIMS Neuroscience Special Issue on Gamma Oscillations,
1:424,
2014.
[bibtexentry]

D.A. Pinotsis and K.J. Friston.
Neural Fields, Masses and Bayesian Inference.
Springer Mathematical Neuroscience Series,
2014.
[bibtexentry]

D.A. Pinotsis,
N.Brunet,
A. Bastos,
V. Litvak,
P.Fries,
and K.J. Friston.
Contrast gain control and horizontal interactions in V1: A DCM study.
NeuroImage,
92:143155,
2014.
Keyword(s): DCM.
[bibtexentry]

L. Rigoux,
K.E. Stephan,
K.J. Friston,
and J. Daunizeau.
Bayesian model selection for group studies  Revisited.
NeuroImage,
84:971985,
2014.
[bibtexentry]

J. Ashburner and G. Ridgway.
Symmetric Diffeomorphic Modeling of Longitudinal Structural MRI.
Frontiers in Neuroscience,
6(197),
02 2013.
ISSN: 1662453X.
[bibtexentry]

G. Barnes,
G. Ridgway,
G. Flandin,
M. Woolrich,
and K.J. Friston.
Setlevel thresholdfree tests on the intrinsic volumes of SPMs.
NeuroImage,
68(100):133140,
2013.
Keyword(s): RFT.
[bibtexentry]

J. Daunizeau,
L. Lemieux,
A.E. Vaudano,
K.J. Friston,
and K.E. Stephan.
An electrophysiological validation of stochastic DCM for fMRI.
Frontiers in Computational Neuroscience,
6(103),
2013.
Keyword(s): DCM.
[bibtexentry]

J. Gross,
S. Baillet,
G. Barnes,
R.N.A. Henson,
A. Hillebrand,
O. Jensen,
K. Jerbi,
V. Litvak,
B. Maess,
R. Oostenveld,
L. Parkkonenand J.R. Taylor,
V. van Wassenhove,
M. Wibral,
and J.M. Schoffelen.
Good practice for conducting and reporting MEG research.
NeuroImage,
65:349363,
2013.
Keyword(s): EEG,
MEG.
[bibtexentry]

Joshua Kahan and Tom Foltynie.
Understanding DCM: Ten simple rules for the clinician.
NeuroImage,
83:542549,
2013.
Keyword(s): DCM,
connectivity.
[bibtexentry]

V. Litvak,
Ashwani Jha,
G. Flandin,
and K.J. Friston.
Convolution models for induced electromagnetic responses.
NeuroImage,
64:388398,
2013.
Keyword(s): EEG,
MEG,
GLM.
[bibtexentry]

R. Moran,
D.A. Pinotsis,
and K.J. Friston.
Neural Masses and Fields in Dynamic Causal Modelling.
Frontiers in Computational Neuroscience,
7(00057),
2013.
Keyword(s): DCM.
[bibtexentry]

D.A. Pinotsis,
E. Hansen,
K.J. Friston,
and V.K. Jirsa.
Anatomical connectivity and the resting state activity of large cortical networks.
NeuroImage,
65(0):127138,
2013.
Keyword(s): connectivity.
[bibtexentry]

D.A. Pinotsis,
Marco Leite,
and K.J. Friston.
On conductancebased neural field models.
Frontiers in Computational Neuroscience,
7(00158),
2013.
Keyword(s): DCM.
[bibtexentry]

D.A. Pinotsis,
D.S. Schwarzkopf,
V. Litvak,
G. Rees,
G. Barnes,
and K.J. Friston.
Dynamic causal modelling of lateral interactions in the visual cortex.
NeuroImage,
66(1):563576,
2013.
Keyword(s): DCM.
[bibtexentry]

K.E. Stephan.
The history of CoCoMac.
NeuroImage,
80:4652,
2013.
Keyword(s): connectivity.
[bibtexentry]

J. Daunizeau,
K.E. Stephan,
and K.J. Friston.
Stochastic Dynamic Causal Modelling of fMRI data: should we care about neural noise?.
NeuroImage,
62(1):464481,
2012.
Keyword(s): DCM.
[bibtexentry]

K.J. Friston,
A. Bastos,
V. Litvak,
K.E. Stephan,
P. Fries,
and R. Moran.
DCM for complexvalued data: Crossspectra, coherence and phasedelays.
NeuroImage,
59(1):439455,
2012.
[bibtexentry]

M.I. Garrido,
G. Barnes,
M. Sahani,
and R.J. Dolan.
Functional evidence for a dual route to amygdala.
Current Biology,
22:129134,
2012.
[bibtexentry]

D.A. Pinotsis,
R. Moran,
and K.J. Friston.
Dynamic causal modeling with neural fields.
NeuroImage,
59(2):12611274,
2012.
Keyword(s): DCM.
[bibtexentry]

J.B. Poline,
J.L. Breeze,
S. Ghosh,
K. Gorgolewski,
Y.O. Halchenko,
M. Hanke,
C. Haselgrove,
K.G. Helmer,
D.B. Keator,
D.S. Marcus,
and others.
Data sharing in neuroimaging research.
Frontiers in Neuroinformatics,
6,
2012.
[bibtexentry]

G. Ridgway,
V. Litvak,
G. Flandin,
K.J. Friston,
and W.D. Penny.
The problem of low variance voxels in statistical parametric mapping; a new hat avoids a 'haircut'.
NeuroImage,
59(3):21312141,
2012.
Keyword(s): EEG,
MEG.
[bibtexentry]

M.J. Rosa,
K.J. Friston,
and W.D. Penny.
Posthoc selection of dynamic causal models.
NeuroImage,
2012.
Note: In Press.
[bibtexentry]

A.M. BastosW.M. Usrey,
R.A. Adams,
G.R. Mangun,
P. Fries,
and K.J. Friston.
Canonical Microcircuits for Predictive Coding.
Neuron,
76(4):695711,
2012.
[bibtexentry]

J. Ashburner.
SPM: a history.
NeuroImage,
2011.
[bibtexentry]

J. Ashburner and K.J. Friston.
Diffeomorphic registration using geodesic shooting and GaussNewton optimisation.
NeuroImage,
55(3):954967,
2011.
[bibtexentry]

J. Ashburner and S. Klöppel.
Multivariate models of intersubject anatomical variability.
NeuroImage,
56(2):422439,
2011.
[bibtexentry]

G. Barnes,
V. Litvak,
M.J. Brookes,
and K.J. Friston.
Controlling false positive rates in massmultivariate tests for electromagnetic responses.
NeuroImage,
56(3):10721081,
2011.
[bibtexentry]

Kay H. Brodersen,
Florent Haiss,
Cheng Soon Ong,
Fabienne Jung,
Marc Tittgemeyer,
Joachim M. Buhmann,
Bruno Weber,
and K.E. Stephan.
Modelbased feature construction for multivariate decoding.
NeuroImage,
56(2):601615,
2011.
[bibtexentry]

K.H Brodersen,
T.M. Schofield,
A.P. Leff,
C.S. Ong,
E.I. Lomakina,
J.M. Buhmann,
and K.E. Stephan.
Generative Embedding for ModelBased Classification of fMRI Data.
PLOS Computational Biology,
7(6):e1002079,
2011.
Keyword(s): DCM.
[bibtexentry]

C. Chu,
J. MourãoMiranda,
Y.C. Chiu,
N. Kriegeskorte,
G. Tan,
and J. Ashburner.
Utilizing temporal information in fMRI decoding: Classifier using kernel regression methods.
NeuroImage,
58(2):560571,
2011.
[bibtexentry]

C. Chu,
Y. Ni,
G. Tan,
C.J. Saunders,
and J. Ashburner.
Kernel regression for fMRI pattern prediction.
NeuroImage,
56(2):662673,
2011.
[bibtexentry]

J. Daunizeau,
O. David,
and K.E. Stephan.
Dynamic causal modelling: A critical review of the biophysical and statistical foundations.
NeuroImage,
58:312322,
2011.
Keyword(s): DCM.
[bibtexentry]

J. Daunizeau,
K. Preuschoff,
K.J. Friston,
and K.E. Stephan.
Optimizing experimental design for comparing models of brain function.
PLoS Comp. Biol.,
7(11):e1002280,
2011.
Keyword(s): DCM.
[bibtexentry]

Jörn Diedrichsen,
G. Ridgway,
K.J. Friston,
and T. Wiestler.
Comparing the similarity and spatial structure of neural representations: A patterncomponent model.
NeuroImage,
55(4):16651678,
2011.
[bibtexentry]

R.N.A. Henson,
D.G. Wakeman,
V. Litvak,
and K.J. Friston.
A parametric empirical Bayesian framework for the EEG/MEG inverse problem: generative models for multisubject and multimodal integration.
Frontiers in Human Neuroscience,
5(76),
2011.
Keyword(s): EEG,
MEG,
Bayesian.
[bibtexentry]

C. Lambert,
L. Zrinzo,
Z. Nagy,
A. Lutti,
M. Hariz,
T. Foltynie,
B. Draganski,
J. Ashburner,
and R. Frackowiak.
Confirmation of functional zones within the human subthalamic nucleus: Patterns of connectivity and subparcellation using diffusion weighted imaging.
Neuroimage,
2011.
[bibtexentry]

V. Litvak,
J. Mattout,
S.J. Kiebel,
C. Phillips,
R.N.A. Henson,
J. Kilner,
G. Barnes,
R. Oostenveld,
J. Daunizeau,
G. Flandin,
W.D. Penny,
and K.J. Friston.
EEG and MEG data analysis in SPM8.
Comput. Intell. Neurosci.,
2011(852961),
2011.
Keyword(s): introduction,
EEG,
MEG.
[bibtexentry]

R. Moran,
N. Mallet,
V. Litvak,
R.J. Dolan,
P.J. Magill,
K.J. Friston,
and P. Brown.
Alterations in Brain Connectivity Underlying Beta Oscillations in Parkinsonism.
PLoS Comput Biol,
7(8):e1002124,
08 2011.
[bibtexentry]

R. Moran,
K.E. Stephan,
R. Dolan,
and K.J. Friston.
Neural fields, spectral responses and lateral connections.
NeuroImage,
55(4):16941708,
2011.
[bibtexentry]

D.A. Pinotsis and K.J. Friston.
Neural fields, spectral responses and lateral connections.
NeuroImage,
55(1):3948,
2011.
Keyword(s): DCM.
[bibtexentry]

M.J. Rosa,
J. Kilner,
and W.D. Penny.
Bayesian Comparison of Neurovascular Coupling Models Using EEGfMRI.
PLOS Computational Biology,
7(6):e1002070,
2011.
Keyword(s): BMC.
[bibtexentry]

N. Weiskopf,
A. Lutti,
G. Helms,
M. Novak,
J. Ashburner,
and C. Hutton.
Unified segmentation based correction of R1 brain maps for RF transmit field inhomogeneities (UNICORT).
NeuroImage,
54(3):21162124,
2011.
[bibtexentry]

J. Chumbley,
G. Flandin,
M.H. Seghier,
and K.J. Friston.
Multinomial inference on distributed responses in SPM.
NeuroImage,
in press,
2010.
[bibtexentry]

J. Chumbley,
K.J. Worsley,
G. Flandin,
and K.J. Friston.
Topological FDR for neuroimaging.
NeuroImage,
49(4):30573064,
2010.
Keyword(s): FDR,
RFT,
topological.
[bibtexentry]

J. Daunizeau,
A.E. Vaudano,
and L. Lemieux.
Bayesian multimodal model comparison: A case study on the generators of the spike and the wave in generalized spikewave complexes.
NeuroImage,
49(1):656667,
2010.
[bibtexentry]

J. Daunizeau,
H.E.M den Ouden,
M. Pessiglione,
S.J. Kiebel,
K.J. Friston,
and K.E. Stephan.
Observing the observer (II): deciding when to decide.
Plos One,
5(12):e15555,
2010.
Keyword(s): Bayesian.
[bibtexentry]

J. Daunizeau,
H.E.M den Ouden,
M. Pessiglione,
K.E. Stephan,
S.J. Kiebel,
and K.J. Friston.
Observing the observer (I): metaBayesian models of learning and decisionmaking.
Plos One,
5(12):e15554,
2010.
Keyword(s): Bayesian.
[bibtexentry]

Harriet Feldman and K.J. Friston.
Attention, uncertainty, and freeenergy.
Frontiers in Human Neuroscience,
4(215),
2010.
Keyword(s): DEM.
[bibtexentry]

K.J. Friston,
J. Daunizeau,
J. Kilner,
and S.J. Kiebel.
Action and behavior: a freeenergy formulation.
Biol. Cybern.,
102(3):227260,
2010.
Keyword(s): DEM.
[bibtexentry]

K.J. Friston,
B. Li,
J. Daunizeau,
and K.E. Stephan.
Network discovery with DCM.
NeuroImage,
in press,
2010.
Keyword(s): DCM.
[bibtexentry]

K.J. Friston,
K.E. Stephan,
Baojuan Li,
and J. Daunizeau.
Generalised Filtering.
Mathematical Problems in Engineering,
621670,
2010.
Keyword(s): DEM.
[bibtexentry]

R.N.A. Henson,
G. Flandin,
K.J. Friston,
and J. Mattout.
A Parametric Empirical Bayesian framework for fMRIconstrained MEG/EEG source reconstruction.
Human Brain Mapping,
31(10):15121531,
2010.
[bibtexentry]

C.H. Kasess,
K.E. Stephan,
A. Weissenbacher,
L. Pezawas,
E. Moser,
and C. Windischberger.
MultiSubject Analyses with Dynamic Causal Modeling.
NeuroImage,
49(4):30653074,
2010.
[bibtexentry]

J. Kilner and K.J. Friston.
Topological Inference for EEG and MEG.
The Annals of Applied Statistics,
4(3):12721290,
2010.
Keyword(s): RFT,
topological,
EEG,
MEG.
[bibtexentry]

V. Litvak,
A. Eusebio,
A. Jha,
R. Oostenveld,
G. Barnes,
W.D. Penny,
L. Zrinzo,
M.I. Hariz,
P. Limousin,
K.J. Friston,
and P. Brown.
Optimised beamforming for simultaneous MEG and intracranial local field potential recordings in deep brain stimulation patients.
NeuroImage,
in press,
2010.
[bibtexentry]

A.C. Marreiros,
S.J. Kiebel,
and K.J. Friston.
A dynamic causal model study of neuronal population dynamics.
NeuroImage,
51(1):91101,
2010.
[bibtexentry]

W.D. Penny,
K.E. Stephan,
J. Daunizeau,
M.J. Rosa,
K.J. Friston,
T.M.Schofield,
and A.P. Leff.
Comparing Families of Dynamic Causal Models.
PLoS Comput Biol,
6(3):e1000709,
2010.
[bibtexentry]

M.J. Rosa,
J. Daunizeau,
and K.J. Friston.
EEGfMRI integration : a critical review of biophysical modelling and data analysis approaches.
J. Integrative Neurosci.,
9(4):453476,
2010.
[bibtexentry]

K.E. Stephan and K.J. Friston.
Analyzing effective connectivity with functional magnetic resonance imaging.
WIREs Cognitive Sience,
1:446459,
2010.
Keyword(s): DCM,
fMRI.
[bibtexentry]

K.E. Stephan,
W.D. Penny,
R. Moran,
H.E. Den Ouden,
J. Daunizeau,
and K.J. Friston.
Ten simple rules for dynamic causal modelling.
NeuroImage,
49(4):30993109,
2010.
Keyword(s): DCM.
[bibtexentry]

H. den Ouden,
J. Daunizeau,
J. Roiser,
K.J. Friston,
and K.E. Stephan.
Striatal Prediction Error Modulates Cortical Coupling.
Journal of Neuroscience,
30(9):32103219,
2010.
[bibtexentry]

J. Ashburner.
Computational anatomy with the SPM software.
Magnetic Resonance Imaging,
2009.
[bibtexentry]

J. Ashburner.
Preparing fMRI data for statistical analysis.
Functional MRI Techniques. Humana Press. Filippi M (ed.),
2009.
[bibtexentry]

C.C. Chen,
R.N.A. Henson,
K.E. Stephan,
J. Kilner,
and K.J. Friston.
Forward and backward connections in the brain: A DCM study of functional asymmetries.
NeuroImage,
45(2):453462,
2009.
Keyword(s): DCM,
MEG.
[bibtexentry]

J. Chumbley and K.J. Friston.
False Discovery Rate Revisited: FDR and Topological Inference Using Gaussian Random Fields.
NeuroImage,
44(2):6270,
2009.
Keyword(s): FDR,
RFT,
topological.
[bibtexentry]

J. Daunizeau,
K.J. Friston,
and S.J. Kiebel.
Variational Bayesian identification and prediction of stochastic nonlinear dynamic causal models.
Physica D: nonlinear phenomena,
238(21):20892118,
2009.
[bibtexentry]

J. Daunizeau,
S.J. Kiebel,
and K.J. Friston.
Dynamic causal modelling of distributed electromagnetic responses.
NeuroImage,
2009.
Keyword(s): DCM,
EEG,
MEG.
[bibtexentry]

K.J. Friston,
J. Daunizeau,
and S.J. Kiebel.
Reinforcement Learning or Active Inference?.
PLOS One,
4(7):e6421,
2009.
Keyword(s): DEM.
[bibtexentry]

K.J. Friston and S.J. Kiebel.
Cortical circuits for perceptual inference.
Neural Networks,
22:10931104,
2009.
Keyword(s): DEM.
[bibtexentry]

M.I. Garrido,
J. Kilner,
S.J. Kiebel,
T. Baldeweg,
and K.J. Friston.
Repetition suppression and plasticity in the human brain.
NeuroImage,
48(1):269279,
2009.
[bibtexentry]

G. Helms,
B. Draganski,
R. Frackowiak,
J. Ashburner,
and N. Weiskopf.
Improved segmentation of deep brain grey matter structures using magnetization transfer (MT) parameter maps.
NeuroImage,
47(1):194198,
2009.
[bibtexentry]

R.N.A. Henson,
J. Mattout,
C. Phillips,
and K.J. Friston.
Selecting forward models for MEG sourcereconstruction using modelevidence.
NeuroImage,
46(1):168176,
2009.
Keyword(s): MEG.
[bibtexentry]

R.N.A. Henson,
E. Mouchlianitis,
and K.J. Friston.
MEG and EEG data fusion: Simultaneous localisation of faceevoked responses.
NeuroImage,
2009.
Keyword(s): EEG,
MEG.
[bibtexentry]

C. Hutton,
B. Draganski,
J. Ashburner,
and N. Weiskopf.
A comparison between voxelbased cortical thickness and voxelbased morphometry in normal aging.
NeuroImage,
48(2):371380,
2009.
[bibtexentry]

S.J. Kiebel,
M.I. Garrido,
R. Moran,
C.C. Chen,
and K.J. Friston.
Dynamic causal modeling for EEG and MEG.
Human Brain Mapping,
30(6):18661876,
2009.
Keyword(s): DCM,
EEG,
MEG.
[bibtexentry]

A. Klein,
J. Andersson,
B.A. Ardekani,
J. Ashburner,
B. Avants,
M.C. Chiang,
G.E. Christensen,
D.L. Collins,
J. Gee,
P. Hellier,
J.H. Song,
M. Jenkinson,
C. Lepage,
D. Rueckert,
P. Thomson,
T. Vercauteren,
R.P. Woods,
J.J. Mann,
and R. Parsey.
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.
NeuroImage,
46(3):786802,
2009.
[bibtexentry]

R. Moran,
K.E. Stephan,
T. Seidenbecher,
H.C. Pape,
R. Dolan,
and K.J. Friston.
Dynamic causal models of steadystate responses.
NeuroImage,
44(3):796811,
2009.
Keyword(s): DCM.
[bibtexentry]

W.D. Penny,
V. Litvak,
L. Fuentemilla,
E. Duzel,
and K.J. Friston.
Dynamic Causal Models for phase coupling.
Journal of Neuroscience Methods,
183(1):1930,
2009.
[bibtexentry]

M.J. Rosa,
S. Bestmann,
L. Harrison,
and W.D. Penny.
Bayesian Model Selection Maps for Group Studies.
NeuroImage,
49(1):217224,
2009.
[bibtexentry]

M.J. Rosa,
J. Kilner,
F. Blankenburg,
O. Josephs,
and W.D. Penny.
Estimating the transfer function from neuronal activity to BOLD using simultaneous EEGfMRI.
NeuroImage,
2009.
[bibtexentry]

K.E. Stephan,
K.J. Friston,
and C. Frith.
Dysconnection in Schizophrenia: From Abnormal Synaptic Plasticity to Failures of Selfmonitoring.
Schizophrenia Bulletin,
35(3):509527,
2009.
[bibtexentry]

K.E. Stephan,
W.D. Penny,
J. Daunizeau,
R. Moran,
and K.J. Friston.
Bayesian model selection for group studies.
NeuroImage,
46(3):100410174,
2009.
Keyword(s): DCM,
BMC,
Bayesian,
group.
[bibtexentry]

K.E. Stephan,
M. Tittgemeyer,
T.R. Knosche,
R. Moran,
and K.J. Friston.
Tractographybased priors for dynamic causal models.
NeuroImage,
47(1):16281638,
2009.
[bibtexentry]

J. Ashburner and K.J. Friston.
Computing average shaped tissue probability templates.
NeuroImage,
45(2):333341,
2008.
[bibtexentry]

C.C. Chen,
S.J. Kiebel,
and K.J. Friston.
Dynamic causal modelling of induced responses.
NeuroImage,
41(4):12931312,
2008.
Keyword(s): DCM.
[bibtexentry]

Matthias Fastenrath,
K.J. Friston,
and S.J. Kiebel.
Dynamical causal modelling for M/EEG: Spatial and temporal symmetry constraints.
NeuroImage,
2008.
Keyword(s): DCM,
MEG,
EEG.
[bibtexentry]

G. Flandin and K.J. Friston.
Statistical Parametric Mapping.
Scholarpedia,
3(4):6232,
2008.
Keyword(s): fMRI,
introduction.
[bibtexentry]

K.J. Friston.
Hierarchical Models in the Brain.
PLOS Computational Biology,
4(11):e1000211,
2008.
Keyword(s): DEM.
[bibtexentry]

K.J. Friston.
Variational filtering.
NeuroImage,
41(3):747766,
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Keyword(s): DEM.
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K.J. Friston,
C. Chu,
Janaina MourãoMiranda,
Oliver Hulme,
G. Rees,
W.D. Penny,
and J. Ashburner.
Bayesian decoding of brain images.
NeuroImage,
39(1):181205,
2008.
Keyword(s): Bayesian,
multivariate.
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K.J. Friston,
L. Harrison,
J. Daunizeau,
S.J. Kiebel,
C. Phillips,
N. TrujilloBareto,
R.N.A. Henson,
G. Flandin,
and J. Mattout.
Multiple sparse priors for the M/EEG inverse problem.
NeuroImage,
39(3):11041120,
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Keyword(s): EEG,
MEG.
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K.J. Friston,
N. TrujilloBareto,
and J. Daunizeau.
DEM: A variational treatment of dynamic systems.
NeuroImage,
41(3):849885,
2008.
Keyword(s): DEM.
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M.I. Garrido,
K.J. Friston,
K.E. Stephan,
S.J. Kiebel,
T. Baldeweg,
and J. Kilner.
The functional anatomy of the MMN: A DCM study of the roving paradigm.
NeuroImage,
42(2):936944,
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Keyword(s): DCM,
EEG.
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L. Harrison,
W.D. Penny,
J. Daunizeau,
and K.J. Friston.
Diffusionbased spatial priors for functional magnetic resonance images.
NeuroImage,
41(2):408423,
2008.
Keyword(s): fMRI,
spatial,
bayesian.
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L. Harrison,
W.D. Penny,
G. Flandin,
C. Ruff,
N. Weiskopf,
and K.J. Friston.
Sparse diffusionbased spatial models for functional magnetic resonance images.
NeuroImage,
2008.
Keyword(s): fMRI,
spatial.
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C. Hutton,
E. De Vita,
J. Ashburner,
R. Deichmann,
and R. Turner.
Voxelbased cortical thickness measurements in MRI.
NeuroImage,
40(4):17011710,
2008.
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S.J. Kiebel,
J. Daunizeau,
C. Phillips,
and K.J. Friston.
Variational Bayesian inversion of the equivalent current dipole model in EEG/MEG.
NeuroImage,
39(2):728741,
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S.J. Kiebel,
M.I. Garrido,
R. Moran,
and K.J. Friston.
Dynamic causal modelling for EEG and MEG.
Cognitive Neurodynamics,
2(2):121136,
2008.
Keyword(s): DCM,
EEG,
MEG.
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V. Litvak and K.J. Friston.
Electromagnetic source reconstruction for group studies.
NeuroImage,
42(4):14901498,
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Keyword(s): EEG,
MEG.
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A.C. Marreiros,
J. Daunizeau,
S.J. Kiebel,
and K.J. Friston.
Population dynamics: Variance and the sigmoid activation function.
NeuroImage,
42(1):147157,
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Keyword(s): DCM,
EEG.
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A.C. Marreiros,
S.J. Kiebel,
J. Daunizeau,
L. Harrison,
and K.J. Friston.
Population dynamics under the Laplace assumption.
NeuroImage,
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A.C. Marreiros,
S.J. Kiebel,
and K.J. Friston.
Dynamic causal modelling for fMRI: A twostate model.
NeuroImage,
39:269278,
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Keyword(s): DCM.
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R. Moran,
S.J. Kiebel,
N. Rombach,
W.T. O'Connor,
K.J. Murphy,
R.B. Reilly,
and K.J. Friston.
Bayesian estimation of synaptic physiology from the spectral responses of neural masses.
NeuroImage,
42(1):272284,
2008.
Keyword(s): Bayesian.
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K.E. Stephan,
L. Kasper,
L. Harrison,
J. Daunizeau,
H. den Ouden,
M. Breakspear,
and K.J. Friston.
Nonlinear Dynamic Causal Models for FMRI.
NeuroImage,
42(2):649662,
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Keyword(s): DCM,
fMRI.
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K.E. Stephan,
J.J. Riera,
G. Deco,
and B. Horwitz.
The Brain Connectivity Workshops: Moving the frontiers of computational systems neuroscience.
NeuroImage,
42(1):19,
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Keyword(s): DCM.
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C. M. Stonnington,
G. Tan,
S. Klöppel,
C. Chu,
B. Draganski,
C.R Jack Jr,
K. Chen,
J. Ashburner,
and R.S.J. Frackowiak.
Interpreting scan data acquired from multiple scanners: A study with Alzheimer's disease.
NeuroImage,
39(3):11801185,
2008.
Keyword(s): mri.
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J. Ashburner.
A Fast Diffeomorphic Image Registration Algorithm.
NeuroImage,
38(1):95113,
2007.
Keyword(s): spatial,
registration,
normalisation,
MRI.
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J. Chumbley,
K.J. Friston,
T. Fearn,
and S.J. Kiebel.
A MetropolisHastings algorithm for dynamic causal models.
NeuroImage,
38(3):478487,
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J. Crinion,
J. Ashburner,
A. Leff,
M. Brett,
C.J. Price,
and K.J. Friston.
Spatial normalization of lesioned brains: Performance evaluation and impact on fMRI analyses.
NeuroImage,
37(3):866875,
2007.
Keyword(s): spatial,
normalisation,
mri.
[bibtexentry]

J. Daunizeau and K.J. Friston.
A mesostatespace model for EEG and MEG.
NeuroImage,
38(1):6781,
2007.
Keyword(s): EEG,
MEG.
[bibtexentry]

G. Flandin and W.D. Penny.
Bayesian fMRI data analysis with sparse spatial basis function priors.
NeuroImage,
34(3):11081125,
2007.
Keyword(s): PPM,
Bayesian,
fMRI,
GLM,
spatial,
hierarchical.
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K.J. Friston,
J. Mattout,
N. TrujilloBareto,
J. Ashburner,
and W.D. Penny.
Variational free energy and the Laplace approximation.
NeuroImage,
34(1):220234,
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M.I. Garrido,
J. Kilner,
S.J. Kiebel,
and K.J. Friston.
Evoked brain responses are generated by feedback loops.
PNAS,
104(52):2096120966,
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Keyword(s): DCM,
EEG.
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M.I. Garrido,
J. Kilner,
S.J. Kiebel,
K.E. Stephan,
and K.J. Friston.
Dynamic causal modelling of evoked potentials: A reproducibility study.
NeuroImage,
36:571580,
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Keyword(s): DCM,
EEG,
MEG.
[bibtexentry]

L. Harrison,
W.D. Penny,
J. Ashburner,
N. TrujilloBareto,
and K.J. Friston.
Diffusionbased spatial priors for imaging.
NeuroImage,
38:677695,
2007.
Keyword(s): fMRI,
GLM,
spatial.
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R.N.A. Henson,
J. Mattout,
K.D. Singh,
G. Rees,
A. Hillebrand,
and K.J. Friston.
Populationlevel inferences for distributed MEG source localization under multiple constraints: Application to faceevoked fields.
NeuroImage,
38:422438,
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Keyword(s): MEG,
REML,
group.
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S.J. Kiebel,
M.I. Garrido,
and K.J. Friston.
Dynamic causal modelling of evoked responses: The role of intrinsic connections.
NeuroImage,
36:332345,
2007.
Keyword(s): DCM,
EEG,
MEG.
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S.J. Kiebel,
S. Klöppel,
N. Weiskopf,
and K.J. Friston.
Dynamic causal modeling: A generative model of slice timing in fMRI.
NeuroImage,
34:14871496,
2007.
Keyword(s): fMRI,
DCM,
sampling.
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J. Mattout,
R.N.A. Henson,
and K.J. Friston.
Canonical Source Reconstruction for MEG.
Comput Intell Neurosci.,
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Keyword(s): MEG.
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R. Moran,
S.J. Kiebel,
K.E. Stephan,
R.B. Reilly,
J. Daunizeau,
and K.J. Friston.
A neural mass model of spectral responses in electrophysiology.
NeuroImage,
37(3):706720,
2007.
Keyword(s): EEG.
[bibtexentry]

W.D. Penny and K.J. Friston.
Functional Imaging.
Scholarpedia,
2(5):1478,
2007.
Keyword(s): fMRI,
EEG,
MEG,
introduction.
[bibtexentry]

W.D. Penny,
J. Kilner,
and F. Blankenburg.
Robust Bayesian General Linear Models.
NeuroImage,
36(3):661671,
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Keyword(s): GLM.
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K.E. Stephan,
L. Harrison,
S.J. Kiebel,
O. David,
W.D. Penny,
and K.J. Friston.
Dynamic causal models of neural system dynamics: current state and future extensions.
Journal of Biosciences,
pp 129144,
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Keyword(s): DCM,
fMRI.
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K.E. Stephan,
J.C. Marshall,
W.D. Penny,
K.J. Friston,
and G.R. Fink.
Interhemispheric integration of visual processing during taskdriven lateralization.
Journal of Neuroscience,
27:35123522,
2007.
Keyword(s): DCM,
fMRI.
[bibtexentry]

K.E. Stephan,
N. Weiskopf,
P.M. Drysdale,
P.A. Robinson,
and K.J. Friston.
Comparing hemodynamic models with DCM.
NeuroImage,
38:387401,
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Keyword(s): DCM,
bayesian.
[bibtexentry]

O. David,
S.J. Kiebel,
L. Harrison,
J. Mattout,
J. Kilner,
and K.J. Friston.
Dynamic Causal Modelling of Evoked Responses in EEG and MEG.
NeuroImage,
30:12551272,
2006.
Keyword(s): DCM,
EEG,
MEG.
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S.J. Kiebel,
O. David,
and K.J. Friston.
Dynamic Causal Modelling of Evoked Responses in EEG/MEG with leadfield parameterization.
NeuroImage,
30:12731284,
2006.
Keyword(s): EEG,
MEG,
DCM.
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J. Mattout,
C. Phillips,
W.D. Penny,
M. Rugg,
and K.J. Friston.
MEG source localization under multiple constraints: an extended Bayesian framework.
NeuroImage,
30(3):753767,
2006.
Keyword(s): EEG,
MEG.
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U. Noppeney and W.D. Penny.
Two approaches to repetition suppression.
Human Brain Mapping,
27:411416,
2006.
Keyword(s): fMRI.
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J. Ashburner and K.J. Friston.
Unified segmentation.
NeuroImage,
26:839851,
2005.
Keyword(s): spatial,
VBM,
Bayesian,
registration,
normalisation,
MRI,
segment.
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K.J. Friston,
R.N.A. Henson,
C. Phillips,
and J. Mattout.
Bayesian estimation of evoked and induced responses.
Human Brain Mapping,
27:722735,
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Keyword(s): EEG,
MEG.
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K.J. Friston,
W.D. Penny,
and D.E. Glaser.
Conjunction revisited.
NeuroImage,
25(3):661667,
2005.
Keyword(s): conjunction.
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K.J. Friston,
K.E. Stephan,
T.E. Lund,
A. Morcom,
and S.J. Kiebel.
Mixedeffects and fMRI studies.
NeuroImage,
24:244252,
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Keyword(s): fMRI,
GLM.
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L. Harrison,
O. David,
and K.J. Friston.
Stochastic models of neuronal dynamics.
NeuroImage,
360:10751091,
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Keyword(s): fMRI,
GLM,
spatial.
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S.J. Kiebel,
C. TallonBaudry,
and K.J. Friston.
Parametric analysis of oscillatory activity as measured with EEG/MEG.
Human Brain Mapping,
26(3):170177,
2005.
Keyword(s): EEG,
GLM,
ERP,
MEG.
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J. Kilner,
S.J. Kiebel,
and K.J. Friston.
Applications of random field theory to electrophysiology.
Neuroscience Letters,
374:174178,
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A. Mechelli,
C.J. Price,
K.J. Friston,
and J. Ashburner.
VoxelBased Morphometry of the Human Brain: Methods and Applications.
Current Medical Imaging Reviews,
pp 105113,
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Keyword(s): VBM.
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T.E. Nichols,
M. Brett,
J. Andersson,
T. Wager,
and J.B. Poline.
Valid conjunction inference with the minimum statistic.
NeuroImage,
25:653660,
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Keyword(s): conjunction.
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D. Pantazis,
T.E. Nichols,
S. Baillet,
and R.M. Leahy.
A comparison of random field theory and permutation methods for the statistical analysis of MEG data..
NeuroImage,
25:383394,
2005.
Keyword(s): RFT,
MEG,
nonparametric.
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W.D. Penny,
G. Flandin,
and N. TrujilloBareto.
Bayesian Comparison of Spatially Regularised General Linear Models.
Human Brain Mapping,
28:275293,
2005.
Keyword(s): Bayesian,
fMRI,
PPM,
GLM.
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W.D. Penny,
Z. Ghahramani,
and K.J. Friston.
Bilinear Dynamical Systems.
Phil Trans R Soc B,
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Keyword(s): Dynamic,
Markov,
fMRI.
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W.D. Penny,
N. TrujilloBareto,
and K.J. Friston.
Bayesian fMRI time series analysis with spatial priors.
NeuroImage,
24(2):350362,
2005.
Keyword(s): Spatial,
fMRI.
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C. Phillips,
J. Mattout,
M.D. Rugg,
P. Maquet,
and K.J. Friston.
An empirical Bayesian solution to the source reconstruction problem in EEG.
NeuroImage,
24:9971011,
2005.
Keyword(s): EEG,
bayesian.
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K.E. Stephan,
W.D. Penny,
J.C. Marshall,
G.R. Fink,
and K.J. Friston.
Investigating the functional role of Callosal connections with Dynamic Causal Models.
Ann. N.Y. Acad. Sci.,
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2005.
Keyword(s): DCM.
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K.J. Friston,
W.D. Penny,
and O. David.
Modelling brain responses.
In M.F. Glabus, editor, International Review of Neurobiology, Neuroimaging, Part A.
Elsevier,
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Keyword(s): Introduction.
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O. David,
D. Cosmelli,
and K.J. Friston.
Evaluation of different measures of functional connectivity using a neural mass model.
NeuroImage,
21(2):659673,
2004.
Keyword(s): connectivity,
dynamical,
EEG.
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K.J. Friston and J. Ashburner.
Generative and recognition models for neuroanatomy.
NeuroImage,
23(1):2124,
2004.
Keyword(s): spatial,
Bayesian,
EM.
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S. Hayasaka and T.E. Nichols.
Combining voxel intensity and cluster extent with permutation test framework.
NeuroImage,
23:5463,
2004.
Keyword(s): nonparametric,
cluster.
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S. Hayasaka,
K.L. Phan,
I. Liberzon,
K.J. Worsley,
and T.E. Nichols.
NonStationary Cluster Size Inference with Random Field and Permutation Methods.
NeuroImage,
22:676687,
2004.
Keyword(s): Cluster,
RFT,
nonparametric.
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S.J. Kiebel and K.J. Friston.
Statistical Parametric Mapping for EventRelated Potentials I: Generic Considerations.
NeuroImage,
22(2):492502,
2004.
Keyword(s): EEG,
GLM,
ERP,
MEG.
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S.J. Kiebel and K.J. Friston.
Statistical Parametric Mapping for EventRelated Potentials II: A Hierarchical Temporal Model.
NeuroImage,
22(2):503520,
2004.
Keyword(s): EEG,
GLM,
ERP,
MEG.
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W.D. Penny,
K.E. Stephan,
A. Mechelli,
and K.J. Friston.
Comparing Dynamic Causal Models.
NeuroImage,
22(3):11571172,
2004.
Keyword(s): Bayesian,
connectivity,
fMRI,
DCM,
BMC.
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W.D. Penny,
K.E. Stephan,
A. Mechelli,
and K.J. Friston.
Modelling Functional Integration: A Comparison of Structural Equation and Dynamic Causal and Models.
NeuroImage,
23:264274,
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Note: Supplement 1.
Keyword(s): introduction,
connectivity,
DCM.
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N. Ramnani,
T.E.J. Behrens,
W.D. Penny,
and P.M. Matthews.
New approaches for exploring anatomic and functional connectivity in the human brain.
Biological Psychiatry,
2004.
Note: In Press.
Keyword(s): introduction,
DCM.
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K.E. Stephan.
On the role of general system theory for functional neuroimaging.
Journal of Anatomy,
205:443470,
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Keyword(s): DCM.
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K.E. Stephan,
L. Harrison,
W.D. Penny,
and K.J. Friston.
Biophysical models of fMRI responses.
Current Opinion in Neurobiology,
14(5):629635,
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W.D. Penny and K.J. Friston.
Classical and Bayesian Iinference in fMRI.
In L. Landini, editor, Advanced Image Processing in Magnetic Resonance Imaging.
Marcel Dekker,
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J. Ashburner,
J.G. Csernansky,
C. Davatzikos,
N.C. Fox,
G.B. Frisoni,
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Computerassisted imaging to assess brain structure in healthy and diseased brains.
The Lancet Neurology,
2(2):7988,
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Keyword(s): mri.
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O. David and K.J. Friston.
A neural mass model for MEG/EEG: coupling and neuronal dynamics.
NeuroImage,
20(3):17431755,
2003.
Keyword(s): nonlinear,
dynamical,
EEG.
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K.J. Friston,
L. Harrison,
and W.D. Penny.
Dynamic Causal Modelling.
NeuroImage,
19(4):12731302,
2003.
Keyword(s): connectivity,
fMRI,
DCM.
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K.J. Friston and W.D. Penny.
Posterior probability maps and SPMs.
NeuroImage,
19(3):12401249,
2003.
Keyword(s): Bayesian,
hierarchical,
PPM,
EM.
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D.R. Gitelman,
W.D. Penny,
J. Ashburner,
and K.J. Friston.
Modeling regional and psychophysiologic interactions in fMRI: the importance of hemodynamic deconvolution.
NeuroImage,
19:200207,
2003.
Keyword(s): connectivity,
fMRI,
PPI.
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L. Harrison,
W.D. Penny,
and K.J. Friston.
Multivariate Autoregressive Modelling of fMRI time series.
NeuroImage,
19(4):14771491,
2003.
Keyword(s): connectivity,
fMRI.
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S. Hayasaka and T.E. Nichols.
Validating cluster size inference: random field and permutation methods.
NeuroImage,
20:23432356,
2003.
Keyword(s): Cluster,
RFT,
nonparametric.
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R.N.A. Henson,
Y. GoshenGottstein,
T. Ganel,
L.J. Otten,
A. Quayle,
and M.D. Rugg.
Electrophysiological and hemodynamic correlates of face perception, recognition and priming.
Cerebral Cortex,
13:793805,
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Keyword(s): fMRI,
EEG.
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F.G. Hillary,
J. Steffener,
B.B. Biswal,
G. Lange,
J. DeLuca,
and J. Ashburner.
FMRI technology and traumatic brain injury rehabilitation: Guidelines for methodological and conceptual pitfalls.
Journal of Head Trauma Rehabilitation,
17(5):411430,
2003.
Keyword(s): mri.
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S.J. Kiebel,
D.E. Glaser,
and K.J. Friston.
A heuristic for the degrees of freedom of statistics based on multiple variance parameters.
NeuroImage,
20(1):466478,
2003.
Keyword(s): autocorrelation,
nonsphericity.
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W.L. Luo and T.E. Nichols.
Diagnosis and Exploration of Massively Univariate Neuroimaging Models.
NeuroImage,
19:10141032,
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Keyword(s): GLM.
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A. Mechelli,
R.N.A. Henson,
C.J. Price,
and K.J. Friston.
Comparing eventrelated and epoch analysis in blocked design fMRI.
NeuroImage,
18(3):806810,
2003.
Keyword(s): design,
eventrelated,
fMRI.
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A. Mechelli,
C.J. Price,
R.N.A. Henson,
and K.J. Friston.
Estimating efficiency a priori: a comparison of blocked and randomized designs.
NeuroImage,
18(3):798805,
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Keyword(s): design,
eventrelated,
fMRI.
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T.E. Nichols and S. Hayasaka.
Controlling the Familywise Error Rate in Functional Neuroimaging: A Comparative Review.
Statistical Methods in Medical Research,
12:419446,
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Keyword(s): RFT,
nonparametric.
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W.D. Penny and K.J. Friston.
Mixtures of General Linear Models for Functional Neuroimaging.
IEEE Transactions on Medical Imaging,
22(4):504514,
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Keyword(s): Mixture,
GLM,
Bayesian,
fMRI,
spatial,
EM.
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W.D. Penny,
S.J. Kiebel,
and K.J. Friston.
Variational Bayesian Inference for fMRI time series.
NeuroImage,
19(3):727741,
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Keyword(s): autocorrelation,
Bayesian,
fMRI,
PPM.
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T.D. Wager and T.E. Nichols.
Optimization of Experimental Design in fMRI: A General Framework Using a Genetic Algorithm.
NeuroImage,
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Keyword(s): design.
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J. Ashburner and K.J. Friston.
Highdimensional image warping.
In R.S.J. Frackowiak,
K.J. Friston,
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R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
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Academic Press,
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J. Ashburner and K.J. Friston.
Image segmentation.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
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Keyword(s): introduction.
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J. Ashburner and K.J. Friston.
Morphometry.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): introduction.
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J. Ashburner and K.J. Friston.
Rigid body registration.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): introduction.
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J. Ashburner and K.J. Friston.
Spatial normalization using basis functions.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): introduction.
[bibtexentry]

M. Brett,
W.D. Penny,
and S.J. Kiebel.
Introduction to Random field theory.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): introduction,
RFT.
[bibtexentry]

K.J. Friston.
Dynamic Causal Models.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): connectivity,
dynamical,
Bayesian,
DCM.
[bibtexentry]

K.J. Friston.
Functional connectivity.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): connectivity.
[bibtexentry]

K.J. Friston.
Functional integration.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): connectivity.
[bibtexentry]

K.J. Friston.
Introduction: Experimental design and statistical parametric mapping.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): GLM,
introduction.
[bibtexentry]

K.J. Friston.
Mathematical appendix.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): connectivity.
[bibtexentry]

K.J. Friston.
Volterra kernels and connectivity.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): connectivity,
volterra,
nonlinear.
[bibtexentry]

D.E. Glaser.
Hemodynamic modelling.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): nonsphericity.
[bibtexentry]

D.E. Glaser.
Variance Components.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): nonsphericity.
[bibtexentry]

R.N.A. Henson.
Analysis of fMRI time series.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): GLM,
introduction,
contrasts.
[bibtexentry]

S.J. Kiebel.
The general linear model.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): introduction.
[bibtexentry]

T.E. Nichols and A.P. Holmes.
Nonparametric approaches.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): nonparametric,
RFT,
group.
[bibtexentry]

W.D. Penny and K.J. Friston.
Classical and Bayesian inference.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): Bayesian,
fMRI,
hierarchical,
nonsphericity,
PPM,
REML.
[bibtexentry]

W.D. Penny,
A.P. Holmes,
and K.J. Friston.
Hierarchical Models.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): Bayesian,
GLM,
group,
introduction,
RFX,
hierarchical.
[bibtexentry]

W.D. Penny,
A.P. Holmes,
and K.J. Friston.
Random effects analysis.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): RFX,
group,
introduction.
[bibtexentry]

J.B. Poline.
Contrasts and classical inference.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): GLM,
introduction,
contrasts.
[bibtexentry]

K.J. Worsley.
Developments in random field theory.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
K.J. Friston,
C.J. Price,
S. Zeki,
J. Ashburner,
and W.D. Penny, editors, Human Brain Function.
Academic Press,
2nd edition,
2003.
Keyword(s): RFT.
[bibtexentry]

K.J. Friston.
Bayesian Estimation of Dynamical Systems: An Application to fMRI.
NeuroImage,
16:513530,
2002.
Keyword(s): dynamical,
Bayesian,
fMRI.
[bibtexentry]

K.J. Friston,
D.E. Glaser,
R.N.A. Henson,
S.J. Kiebel,
C. Phillips,
and J. Ashburner.
Classical and Bayesian Inference in Neuroimaging: Applications.
NeuroImage,
16:484512,
2002.
Keyword(s): Bayesian,
fMRI,
PPM.
[bibtexentry]

K.J. Friston,
W.D. Penny,
C. Phillips,
S.J. Kiebel,
G. Hinton,
and J. Ashburner.
Classical and Bayesian Inference in Neuroimaging: Theory.
NeuroImage,
16:465483,
2002.
Keyword(s): Bayesian,
PPM,
EM,
REML.
[bibtexentry]

C.R. Genovese,
N. Lazar,
and T.E. Nichols.
Thresholding of Statistical Maps in Functional Neuroimaging Using the False Discovery Rate.
NeuroImage,
pp 870878,
2002.
Keyword(s): FDR.
[bibtexentry]

C. Good,
R. Scahill,
N.C. Fox,
J. Ashburner,
K.J. Friston,
D. Chan,
W.R. Crum,
M.N. Rossor,
and R.S.J. Frackowiak.
Automatic Differentiation of Anatomical Patterns in the Human Brain: Validation with Studies of Degenerative Dementias.
NeuroImage,
17(1):2946,
2002.
Keyword(s): mri.
[bibtexentry]

R.N.A. Henson,
C.J. Price,
M.D. Rugg,
R. Turner,
and K.J. Friston.
Detecting latency differences in eventrelated BOLD responses: application to words versus nonwords and initial versus repeated face presentations.
NeuroImage,
15(1):8397,
2002.
Keyword(s): fMRI,
eventrelated.
[bibtexentry]

R.N.A. Henson,
T. Shallice,
M.L. GornoTempini,
and R. Dolan.
Face repetition effects in implicit and explicit memory tests as measured by fMRI.
Cerebral Cortex,
12:178186,
2002.
Keyword(s): fMRI.
[bibtexentry]

C. Hutton,
A. Bork,
O. Josephs,
R. Deichmann,
J. Ashburner,
and R. Turner.
Image distortion correction in fMRI: A quantitative evaluation.
NeuroImage,
16:217240,
2002.
[bibtexentry]

S.J. Kiebel and K.J. Friston.
Anatomically informed basis functions in multisubject studies.
Human Brain Mapping,
16(1):3646,
2002.
Keyword(s): smoothness,
spatial,
group.
[bibtexentry]

A. Mechelli,
W.D. Penny,
C.J. Price,
D.R. Gitelman,
and K.J. Friston.
Effective connectivity and intersubject variability: using a multisubject network to test differences and commonalities.
NeuroImage,
17(3):14591469,
2002.
Keyword(s): connectivity,
group.
[bibtexentry]

T.E. Nichols and A.P. Holmes.
Nonparametric Permutation Tests for Functional Neuroimaging: A Primer with Examples.
Human Brain Mapping,
15:125,
2002.
Keyword(s): nonparametric.
[bibtexentry]

T.E. Nichols,
J. Qi,
A. Asma,
and R.L. Leahy.
Spatiotemporal Reconstruction of List Mode PET Data.
IEEE Transactions on Medical Imaging,
21:396404,
2002.
Keyword(s): PET.
[bibtexentry]

C. Phillips,
M.D. Rugg,
and K.J. Friston.
Anatomically Informed Basis Functions for EEG Source Localisation: Combining Functional and Anatomical Constraints.
NeuroImage,
16(3):678695,
2002.
Keyword(s): spatial,
MRI,
EEG.
[bibtexentry]

C. Phillips,
M.D. Rugg,
and K.J. Friston.
Systematic Regularization of Linear Inverse Solutions of the EEG Source Localisation Problem.
NeuroImage,
17(1):287301,
2002.
Keyword(s): EEG,
spatial.
[bibtexentry]

C.H. Salmond,
J. Ashburner,
F. VarghaKhadem,
A. Connelly,
D. G. Gadian,
and K.J. Friston.
The precision of anatomical normalisation in the medial temporal lobe using spatial basis functions.
NeuroImage,
17(1):507512,
2002.
Keyword(s): spatial.
[bibtexentry]

C.H. Salmond,
J. Ashburner,
F. VarghaKhadem,
A. Connelly,
and D. G. Gadian andK.J. Friston.
The precision of anatomical normalisation in the medial temporal lobe using spatial basis functions.
NeuroImage,
17(1):507512,
2002.
Keyword(s): spatial.
[bibtexentry]

D. Veltman,
A. Mechelli,
K.J. Friston,
and C.J. Price.
The importance of distributed sampling in blocked functional magnetic resonance imaging designs.
NeuroImage,
17(3):12031206,
2002.
Keyword(s): design,
eventrelated,
fMRI.
[bibtexentry]

J. Andersson,
J. Ashburner,
and K.J. Friston.
A global estimator unbiased by local changes.
NeuroImage,
13(6):11931206,
2001.
Keyword(s): spatial.
[bibtexentry]

J. Andersson,
C. Hutton,
J. Ashburner,
R. Turner,
and K.J. Friston.
Modelling geometric deformations in EPI time series.
NeuroImage,
13(5):903919,
2001.
Keyword(s): spatial.
[bibtexentry]

C. GoodadndJ. Ashburner and R.S.J. Frackowiak.
Computational neuroanatomy: new perspectives for neuroradiology.
Rev Neurol (Paris),
157(89):797806,
2001.
[bibtexentry]

J. Ashburner and K.J. Friston.
Why voxelbased morphometry should be used.
NeuroImage,
14(6):12381243,
2001.
Keyword(s): VBM,
spatial.
[bibtexentry]

M. Brett,
A. Leff,
C. Rorden,
and J. Ashburner.
Spatial Normalization of Brain Images with Focal Lesions Using Cost Function Masking.
NeuroImage,
14(2):486500,
2001.
Keyword(s): spatial,
normalisation,
mri.
[bibtexentry]

R.N.A. Henson,
M.D. Rugg,
and K.J. Friston.
The choice of basis functions in eventrelated fMRI.
NeuroImage,
13(6):149,
June 2001.
Note: Supplement 1.
Keyword(s): eventrelated.
[bibtexentry]

A. Mechelli,
C.J. Price,
and K.J. Friston.
Non Linear Coupling Between Evoked rCBF and BOLD Signals: A Simulation Study of Hemodynamic Responses.
NeuroImage,
14(4):862872,
2001.
Keyword(s): volterra,
nonlinear,
simulation.
[bibtexentry]

J. Ashburner,
J. Andersson,
and K.J. Friston.
Image Registration using a Symmetric Prior  in ThreeDimensions.
Human Brain Mapping,
9(4):212225,
2000.
Keyword(s): spatial,
Bayesian,
registration,
MRI.
[bibtexentry]

J. Ashburner and K.J. Friston.
VoxelBased Morphometry  The Methods.
NeuroImage,
11:805821,
2000.
Keyword(s): spatial,
VBM,
MRI.
[bibtexentry]

C. Buchel and K.J. Friston.
Assessing interactions among neuronal systems using functional neuroimaging.
Neural Networks,
13:871882,
2000.
Keyword(s): connectivity,
introduction.
[bibtexentry]

K.J. Friston and C. Buchel.
Attentional modulation of effective connectivity from V2 to V5/MT in humans.
Proc. Natl. Acad. Sci. USA,
97(13):75917596,
2000.
Keyword(s): connectivity,
fMRI.
[bibtexentry]

K.J. Friston,
O. Josephs,
E. Zarahn,
A.P. Holmes,
S. Rouquette,
and J.B. Poline.
To Smooth or Not to Smooth? Bias and Efficiency in fMRI TimeSeries Analysis.
NeuroImage,
12:196208,
2000.
Keyword(s): fMRI,
autocorrelation,
nonsphericity.
[bibtexentry]

K.J. Friston,
A. Mechelli,
R. Turner,
and C.J. Price.
Nonlinear responses in fMRI: The Balloon model, Volterra kernels and other hemodynamics.
NeuroImage,
12:466477,
2000.
Keyword(s): nonlinear,
fMRI,
dynamical.
[bibtexentry]

K.J. Friston,
J. Phillips,
D. Chawla,
and C. Buchel.
Nonlinear PCA: Characterizing interactions between modes of brain activity.
Phil. Trans. R. Soc. London B,
355:135146,
2000.
Keyword(s): connectivity.
[bibtexentry]

J.B. Hopfinger,
C. Buchel,
A.P. Holmes,
and K.J. Friston.
A study of analysis parameters that influence the sensitivity of eventrelated fMRI analyses.
NeuroImage,
11:326333,
2000.
Keyword(s): eventrelated,
fMRI.
[bibtexentry]

B. Horwitz,
K.J. Friston,
and J.G. Taylor.
Neural Modeling and Functional Brain Imaging: An Overview.
Neural Networks,
13:829846,
2000.
Keyword(s): connectivity.
[bibtexentry]

S.J. Kiebel,
R. Goebel,
and K.J. Friston.
Anatomically Informed Basis Functions.
NeuroImage,
11(6):656667,
2000.
Keyword(s): fMRI,
MRI,
spatial.
[bibtexentry]

D. McGonigle,
A. Howseman,
B.S. Athwal,
K.J. Friston,
R.S.J. Frackowiak,
and A.P. Holmes.
Variability in fMRI: an examination of intersession differences.
NeuroImage,
11(6):708734,
2000.
Keyword(s): RFX,
group.
[bibtexentry]

K.J. Worsley and K.J. Friston.
A test for a conjunction.
Statistics and Probability Letters,
47:135140,
2000.
Keyword(s): conjunction,
RFT.
[bibtexentry]

K.J. Friston.
Experimental Design and Statistical Issues.
In Brain Mapping: The Disorders,
pages 3358.
Academic Press,
2000.
Keyword(s): design,
GLM.
[bibtexentry]

J. Ashburner,
J. Andersson,
and K.J. Friston.
HighDimensional Nonlinear Image Registration using Symmetric Priors.
NeuroImage,
9:619628,
1999.
Keyword(s): spatial,
nonlinear,
Bayesian,
registration,
MRI.
[bibtexentry]

J. Ashburner and K.J. Friston.
Nonlinear Spatial Normalization using Basis Functions.
Human Brain Mapping,
7(4):254266,
1999.
Keyword(s): spatial,
nonlinear,
normalisation,
MRI.
[bibtexentry]

C. Buchel,
J.T. Coull,
and K.J. Friston.
The predictive value of changes in effective connectivity for human learning.
Science,
pp 15381541,
1999.
Keyword(s): connectivity,
fMRI.
[bibtexentry]

K.J. Friston,
A.P. Holmes,
C.J. Price,
C. Buchel,
and K.J. Worsley.
Multisubject fMRI Studies and Conjunction Analyses.
NeuroImage,
10:385396,
1999.
Keyword(s): group,
conjunction,
fMRI.
[bibtexentry]

K.J. Friston,
A.P. Holmes,
and K.J. Worsley.
How Many subjects constitute a study ?.
NeuroImage,
10:15,
1999.
Keyword(s): group,
design.
[bibtexentry]

K.J. Friston,
J. Phillips,
D. Chawla,
and C. Buchel.
Revealing interactions among brain systems with nonlinear PCA.
Human Brain Mapping,
8(3):9297,
1999.
Keyword(s): connectivity,
nonlinear.
[bibtexentry]

K.J. Friston,
E. Zarahn,
O. Josephs,
R.N.A. Henson,
and A.M. Dale.
Stochastic designs in eventrelated fMRI.
NeuroImage,
10:607619,
1999.
Keyword(s): eventrelated,
fMRI,
design.
[bibtexentry]

O. Josephs and R.N.A. Henson.
Eventrelated functional magnetic resonance imaging: modelling, inference and optimization.
Phil. Trans. R. Soc. London B,
354:12151228,
1999.
Keyword(s): eventrelated,
fMRI,
design.
[bibtexentry]

S.J. Kiebel,
J.B. Poline,
K.J. Friston,
A.P. Holmes,
and K.J. Worsley.
Robust Smoothness Estimation in Statistical Parametric Maps Using Standardized Residuals from the General Linear Model.
NeuroImage,
10:756766,
1999.
Keyword(s): smoothness,
RFT,
GLM.
[bibtexentry]

K.M. Petersson,
T.E. Nichols,
J.B. Poline,
and A.P. Holmes.
Statistical limitations in functional neuroimaging I. Noninferential methods and statistical models.
Phil. Trans. R. Soc. London B,
354:12391260,
1999.
Keyword(s): introduction.
[bibtexentry]

K.M. Petersson,
T.E. Nichols,
J.B. Poline,
and A.P. Holmes.
Statistical limitations in functional neuroimaging II. Signal detection and statistical inference.
Phil. Trans. R. Soc. London B,
354:12611281,
1999.
Keyword(s): introduction.
[bibtexentry]

C.J. Price,
D.J. Veltman,
J. Ashburner,
O. Josephs,
and K.J. Friston.
The critical relationship between the timing of the stimulus presentation and data acquisition in blocked designs with fMRI.
NeuroImage,
10:3644,
1999.
Keyword(s): fMRI.
[bibtexentry]

B. A. Strange,
C.M. Portas,
R. Dolan,
A.P. Holmes,
and K.J. Friston.
Random effects analyses for eventrelated fMRI.
NeuroImage,
9:36,
1999.
Keyword(s): RFX,
eventrelated,
fMRI.
[bibtexentry]

F.G. Woermann,
S. Free,
M. Koepp,
J. Ashburner,
and J.S. Duncan.
VoxelbyVoxel Comparison of Automatically Segmented Cerebral Gray Matter  RaterIndependent Comparison of Structural MRI in Patients with Epilepsy.
NeuroImage,
10(4):373384,
1999.
Keyword(s): mri.
[bibtexentry]

J. Ashburner and K.J. Friston.
Spatial Normalization.
In A.W. Toga, editor, Brain Warping,
pages 2744.
Academic Press,
1999.
Keyword(s): spatial,
normalisation,
MRI.
[bibtexentry]

J. Ashburner and K.J. Friston.
HighDimensional Nonlinear Image Registration.
NeuroImage,
7(4):S737,
1998.
Keyword(s): spatial,
registration,
MRI.
[bibtexentry]

J. Ashburner and K.J. Friston.
MRI Sensitivity Correction and Tissue Classification.
NeuroImage,
7(4):S107,
1998.
Keyword(s): spatial,
MRI.
[bibtexentry]

J. Ashburner,
C. Hutton,
R.S.J. Frackowiak,
I. Johnsrude,
C.J. Price,
and K.J. Friston.
Identifying Global Anatomical Differences: DeformationBased Morphometry.
Human Brain Mapping,
6(5):348357,
1998.
Keyword(s): spatial,
normalisation,
MRI.
[bibtexentry]

C. Buchel and K.J. Friston.
Dynamic Changes in Effective Connectivity Characterized by Variable Parameter Regression and Kalman Filtering.
Human Brain Mapping,
6(5):403408,
1998.
Keyword(s): connectivity,
fMRI.
[bibtexentry]

C. Buchel,
A.P. Holmes,
G. Rees,
and K.J. Friston.
Characterizing stimulusresponse functions using nonlinear regressors in parametric fMRI experiments.
NeuroImage,
8:140148,
1998.
Keyword(s): nonlinear,
parametric,
fMRI.
[bibtexentry]

C. Buchel,
O. Josephs,
G. Rees,
R. Turner,
and C. FrithK.J. Friston.
The functional anatomy of attention to visual motion. A functional MRI study.
Brain,
121:12811294,
1998.
[bibtexentry]

K.J. Friston.
Imaging Neuroscience: principles or maps?.
Proc. Natl. Acad. Sci. USA,
95:796802,
1998.
Keyword(s): introduction,
connectivity.
[bibtexentry]

K.J. Friston.
Modes or models: a critique on independent component analysis for fMRI.
Trends in Cognitive Science,
2:373374,
1998.
Keyword(s): connectivity.
[bibtexentry]

K.J. Friston,
P. Fletcher,
O. Josephs,
A.P. Holmes,
M.D. Rugg,
and R. Turner.
Eventrelated fMRI: characterizing differential responses.
NeuroImage,
7:3040,
1998.
Keyword(s): eventrelated,
fMRI.
[bibtexentry]

K.J. Friston,
O. Josephs,
G. Rees,
and R. Turner.
Nonlinear eventrelated responses in fMRI.
Magnetic Resonance in Medicine,
39:4152,
1998.
Keyword(s): nonlinear,
eventrelated,
fMRI.
[bibtexentry]

K.J. Friston,
C.J. Price,
and C. Buchel.
Designing Activation Experiments..
In B. Gulyas and H.W. MillerGartner, editors, Positron Emission Tomography: A Critical Assessment of Recent Trends.
Kluwer Academic,
1998.
Keyword(s): design,
introduction.
[bibtexentry]

J. Ashburner and K.J. Friston.
Multimodal Image Coregistration and Partitioning  a Unified Framework.
NeuroImage,
6(3):209217,
1997.
Keyword(s): spatial,
registration,
MRI,
PET.
[bibtexentry]

J. Ashburner and K.J. Friston.
The role of registration and spatial normalization in detecting activations in functional imaging.
Clinical MRI/Developments in MR,
7(1):2628,
1997.
Keyword(s): spatial,
registration,
MRI.
[bibtexentry]

J. Ashburner,
P. Neelin,
D. L. Collins,
A. C. Evans,
and K.J. Friston.
Incorporating Prior Knowledge into Image Registration.
NeuroImage,
6:344352,
1997.
Keyword(s): Bayesian,
spatial,
registration,
MRI.
[bibtexentry]

C. Buchel and K.J. Friston.
Modulation of connectivity in visual pathways by attention: Cortical interactions evaluated with structural equation modelling and fMRI.
Cerebral Cortex,
7:768778,
1997.
Keyword(s): connectivity,
fMRI.
[bibtexentry]

C. Buchel,
R. Turner,
and K.J. Friston.
Lateral geniculate activations can be detected using intersubject averaging and fMRI.
Magnetic Resonance in Medicine,
38(691694),
1997.
Keyword(s): fMRI.
[bibtexentry]

K.J. Friston.
Another neural code ?.
NeuroImage,
5:213220,
1997.
Keyword(s): MEG,
connectivity.
[bibtexentry]

K.J. Friston.
Imaging Cognitive Anatomy.
Trends in Cognitive Science,
1:2127,
1997.
Keyword(s): introduction.
[bibtexentry]

K.J. Friston.
Testing for anatomically specified regional effects.
Human Brain Mapping,
5:133136,
1997.
Keyword(s): RFT,
PET,
fMRI.
[bibtexentry]

K.J. Friston,
C. Buchel,
G.R. Fink,
J. Morris,
E. Rolls,
and R. Dolan.
Psychophysiological and modulatory interactions in Neuroimaging.
NeuroImage,
6:218229,
1997.
Keyword(s): connectivity,
fMRI,
PPI.
[bibtexentry]

K.J. Friston,
K.M. Stephan,
and R.S.J. Frackowiak.
Transient phaselocking and dynamic correlations: Are they the same thing?.
Human Brain Mapping,
5:4857,
1997.
Keyword(s): connectivity.
[bibtexentry]

O. Josephs,
R. Turner,
and K.J. Friston.
Eventrelated fMRI.
Human Brain Mapping,
5:243248,
1997.
Keyword(s): eventrelated,
fMRI.
[bibtexentry]

S.J. Kiebel,
J. Ashburner,
J.B. Poline,
and K.J. Friston.
MRI and PET Coregistration  A Cross Validation of Statistical Parametric Mapping and Automated Image Registration.
NeuroImage,
5:271279,
1997.
Keyword(s): PET,
MRI,
registration.
[bibtexentry]

J.B. Poline,
K.J. Worsley,
A.C. Evans,
and K.J. Friston.
Combining spatial extent and peak intensity to test for activations in functional imaging.
NeuroImage,
5(2):8396,
1997.
Keyword(s): RFT,
smoothness.
[bibtexentry]

C.J. Price and K.J. Friston.
Cognitive Conjunction: A New Approach to Brain Activation Experiments.
NeuroImage,
5:261270,
1997.
Keyword(s): conjunction,
design.
[bibtexentry]

C.J. Price,
C.J. Moore,
and K.J. Friston.
Subtractions, conjunctions, and interactions in experimental design of activation studies.
Human Brain Mapping,
5(4):264272,
1997.
Keyword(s): design,
conjunction,
introduction.
[bibtexentry]

J. Ashburner and K.J. Friston.
Spatial transformation of images.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
and J.C. Mazziotta, editors, Human Brain Function,
pages 4358.
Academic Press USA,
1997.
Keyword(s): spatial,
registration,
normalisation,
MRI,
PET,
fMRI.
[bibtexentry]

C. Buchel and K.J. Friston.
Characterizing functional integration.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
and J.C. Mazziotta, editors, Human Brain Function,
pages 127140.
Academic Press USA,
1997.
Keyword(s): connectivity,
introduction.
[bibtexentry]

K.J. Friston.
Analyzing brain images: Principles and overview.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
and J.C. Mazziotta, editors, Human Brain Function,
pages 2541.
Academic Press USA,
1997.
Keyword(s): introduction,
design.
[bibtexentry]

K.J. Friston.
Characterizing distributed functional systems.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
and J.C. Mazziotta, editors, Human Brain Function,
pages 107126.
Academic Press USA,
1997.
Keyword(s): connectivity,
introduction.
[bibtexentry]

K.J. Friston,
C.J. Price,
C. Buchel,
and R.S.J. Frackowiak.
A Taxonomy of Study Design.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
and J.C. Mazziotta, editors, Human Brain Function,
pages 141159.
Academic Press USA,
1997.
Keyword(s): design,
introduction.
[bibtexentry]

A.P. Holmes,
J.B. Poline,
and K.J. Friston.
Characterizing brain images with the general linear model.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
and J.C. Mazziotta, editors, Human Brain Function,
pages 5984.
Academic Press USA,
1997.
Keyword(s): GLM,
introduction,
PET,
fMRI.
[bibtexentry]

J.B. Poline,
A.P. Holmes,
K.J. Worsley,
and K.J. Friston.
Making statistical inferences.
In R.S.J. Frackowiak,
K.J. Friston,
C. Frith,
R. Dolan,
and J.C. Mazziotta, editors, Human Brain Function,
pages 85106.
Academic Press USA,
1997.
Keyword(s): RFT,
GLM,
introduction.
[bibtexentry]

C. Buchel,
R.J.S. Wise,
C.J. Mummery,
J.B. Poline,
and K.J. Friston.
Nonlinear regression in parametric activation studies.
NeuroImage,
4:6066,
1996.
Keyword(s): nonlinear,
parametric,
PET.
[bibtexentry]

K.J. Friston,
C. Frith,
P. Fletcher,
P.F. Liddle,
and R.S.J. Frackowiak.
Functional topography: multidimensional scaling and functional connectivity in the brain.
Cerebral Cortex,
6:156164,
1996.
Keyword(s): connectivity.
[bibtexentry]

K.J. Friston,
J.B. Poline,
A.P. Holmes,
C. Frith,
and R.S.J. Frackowiak.
A multivariate analysis of PET activation studies.
Human Brain Mapping,
4:140151,
1996.
Keyword(s): connectivity,
multivariate,
PET.
[bibtexentry]

K.J. Friston,
C.J. Price,
P. Fletcher,
C. Moore,
and R.S.J. Frackowiak,
and R. Dolan.
The trouble with cognitive subtraction.
NeuroImage,
4:97104,
1996.
Keyword(s): design,
introduction.
[bibtexentry]

K.J. Friston,
Klaus M. Stephan,
J.D. Heather,
C. Frith,
A.A. Ioannides,
L.C. Liu,
M.D. Rugg,
J. Vieth,
H. Keber,
K. Hunter,
and R.S.J. Frackowiak.
A Multivariate Analysis of Evoked Responses in EEG and MEG data.
NeuroImage,
3:167174,
1996.
Keyword(s): connectivity,
multivariate,
EEG,
MEG.
[bibtexentry]

K.J. Friston,
S. Williams,
R. Howard,
R.S.J. Frackowiak,
and R. Turner.
MovementRelated Effects in fMRI TimeSeries.
Magnetic Resonance in Medicine,
35:346355,
1996.
Keyword(s): registration,
spatial,
fMRI.
[bibtexentry]

A.P. Holmes,
R. C. Blair,
J.D.G. Watson,
and I. Ford.
NonParametric Analysis of Statistic Images From Functional Mapping Experiments.
Journal of Cerebral Blood Flow and Metabolism,
16:722,
1996.
Keyword(s): nonparametric,
PET.
[bibtexentry]

K.J. Worsley,
S. Marrett,
P. Neelin,
A. C. Vandal,
K.J. Friston,
and A. C. Evans.
A unified statistical approach for determining significant voxels in images of cerebral activation.
Human Brain Mapping,
4:5873,
1996.
Keyword(s): RFT.
[bibtexentry]

K.J. Friston.
Statistical Parametric Mapping and Other Analysis of Functional Imaging Data.
In Brain Mapping: The Methods,
pages 363385.
Academic Press,
1996.
Keyword(s): introduction,
GLM,
RFT.
[bibtexentry]

K.J. Friston.
Functional and effective connectivity in neuroimaging: A synthesis.
Human Brain Mapping,
2:5678,
1995.
Keyword(s): connectivity.
[bibtexentry]

K.J. Friston.
Statistical Parametric Mapping: Ontology and Current Issues.
Journal of Cerebral Blood Flow and Metabolism,
15:361370,
1995.
Keyword(s): introduction,
design.
[bibtexentry]

K.J. Friston,
J. Ashburner,
C. Frith,
J.B. Poline,
J. D. Heather,
and R.S.J. Frackowiak.
Spatial Registration and Normalization of Images.
Human Brain Mapping,
2:165189,
1995.
Keyword(s): normalisation,
registration.
[bibtexentry]

K.J. Friston,
C. Frith,
R.S.J. Frackowiak,
and R. Turner.
Characterizing Dynamic Brain Responses with fMRI: A multivariate Approach.
NeuroImage,
2:166172,
1995.
Keyword(s): connectivity,
dynamical,
multivariate,
fMRI.
[bibtexentry]

K.J. Friston,
C. Frith,
R. Turner,
and R.S.J. Frackowiak.
Characterizing evoked hemodynamics with fMRI.
NeuroImage,
2:157165,
1995.
Keyword(s): fMRI,
eventrelated.
[bibtexentry]

K.J. Friston,
A.P. Holmes,
J.B. Poline,
P. J. Grasby,
S. C. R. Williams,
R.S.J. Frackowiak,
and R. Turner.
Analysis of fMRI Time Series Revisited.
NeuroImage,
2:4553,
1995.
Keyword(s): fMRI,
autocorrelation,
nonsphericity.
[bibtexentry]

K.J. Friston,
A.P. Holmes,
J.B. Poline,
C.J. Price,
and C. Frith.
Detecting Activations in PET and fMRI: Levels of Inference and Power.
NeuroImage,
40:223235,
1995.
Keyword(s): RFT,
PET,
fMRI.
[bibtexentry]

K.J. Friston,
A.P. Holmes,
K.J. Worsley,
J.B. Poline,
C. Frith,
and R.S.J. Frackowiak.
Statistical Parametric Maps in Functional Imaging: A General Linear Approach.
Human Brain Mapping,
2:189210,
1995.
Keyword(s): GLM,
RFT.
[bibtexentry]

K.J. Friston,
L.G. Ungerleider,
P. Jezzard,
and R. Turner.
Characterizing modulatory interactions between V1 and V2 in human cortex with fMRI.
Human Brain Mapping,
2:211224,
1995.
Keyword(s): connectivity,
fMRI.
[bibtexentry]

J.B. Poline,
K.J. Friston,
K.J. Worsley,
and R.S.J. Frackowiak.
Estimating Smoothness in Statistical Parametric Maps: Confidence Intervals on pValues.
Journal of Computer Assisted Tomography,
19(5):788796,
1995.
Keyword(s): smoothness,
RFT.
[bibtexentry]

K.J. Worsley and K.J. Friston.
Analysis of fMRI TimeSeries Revisited  Again.
NeuroImage,
2:173181,
1995.
Keyword(s): fMRI,
autocorrelation,
nonsphericity.
[bibtexentry]

K.J. Worsley,
J.B. Poline,
A.C. Vandal,
and K.J. Friston.
Tests for distributed, nonfocal brain activation.
NeuroImage,
2(3):183194,
1995.
Keyword(s): RFT,
smoothness.
[bibtexentry]

I.C. Wright,
P.K. McGuire,
J.B. Poline,
J.M. Travere,
R.M. Murray,
C. Frith,
R.S.J. Frackowiak,
and K.J. Friston.
A voxelbased method for the statistical analysis of gray and white matter density applied to schizophrenia.
NeuroImage,
2:244252,
1995.
Keyword(s): spatial,
normalisation,
VBM,
MRI.
[bibtexentry]

K.J. Friston,
P. Jezzard,
and R. Turner.
Analysis of Functional MRI TimeSeries.
Human Brain Mapping,
1:153171,
1994.
Keyword(s): fMRI,
autocorrelation,
nonsphericity.
[bibtexentry]

K.J. Friston,
K.J. Worsley,
R.S.J. Frackowiak,
J.C. Mazziotta,
and A.C. Evans.
Assessing the Significance of Focal Activations Using their Spatial Extent.
Human Brain Mapping,
1:214220,
1994.
Keyword(s): RFT.
[bibtexentry]

K.J. Friston,
C. Frith,
and R.S.J. Frackowiak.
Principal component analysis learning algorithms: A neurobiological analysis.
Proc R Soc B,
254:4754,
1993.
Keyword(s): connectivity.
[bibtexentry]

K.J. Friston,
C. Frith,
and R.S.J. Frackowiak.
Timedependent changes in effective connectivity measured with PET.
Human Brain Mapping,
1:6979,
1993.
Keyword(s): connectivity,
PET.
[bibtexentry]

K.J. Friston,
C. Frith,
F.P. Liddle,
and R.S.J. Frackowiak.
Functional connectivity: The principalcomponent analysis of large (PET) data sets.
Journal of Cerebral Blood Flow and Metabolism,
13:514,
1993.
Keyword(s): connectivity,
PET.
[bibtexentry]

K.J. Friston,
C. Frith,
R.E. Passingham,
P. Liddle,
and R.S.J. Frackowiak.
Motor practice and neurophysiological adaptation in the cerebellum: a positron tomography study.
Proc. Royal Soc. Lond. Series B,
248:223228,
1992.
Keyword(s): PET.
[bibtexentry]

C.J. Price,
R. Wise,
S. Ramsay,
K.J. Friston,
D. Howard,
K. Patterson,
and R.S.J. Frackowiak.
Regional response differences withing the human auditory cortex when listening to words.
Neuroscience Letters,
11:179182,
1992.
Keyword(s): parametric,
fMRI.
[bibtexentry]

K.J. Friston,
C. Frith,
P.F. Liddle,
and R.S.J. Frackowiak.
Comparing functional (PET) images: The assessment of significant change.
Journal of Cerebral Blood Flow and Metabolism,
11:690699,
1991.
Keyword(s): PET,
RFT.
[bibtexentry]

K.J. Friston,
C. Frith,
P. F. Liddle,
and R.S.J. Frackowiak.
Plastic transformation of PET images.
Journal of Computer Assisted Tomography,
15:634639,
1991.
Keyword(s): PET,
normalisation.
[bibtexentry]

K.J. Friston,
C. Frith,
P.F. Liddle,
R. Dolan,
A.A. Lammertsma,
and R.S.J. Frackowiak.
The relationship between global and local changes in PET scans.
Journal of Cerebral Blood Flow and Metabolism,
10:458466,
1990.
Keyword(s): PET.
[bibtexentry]

K.J. Friston,
R.E. Passingham,
J.G. Nutt,
J.D. Heather,
G.V. Sawle,
and R.S.J. Frackowiak.
Localisation in PET images: direct fitting of the intercommissural (ACPC) line.
Journal of Cerebral Blood Flow and Metabolism,
9:690695,
1989.
Keyword(s): spatial,
PET,
normalisation.
[bibtexentry]
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